RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 BLACEA4D250 179 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 RPL36A-HNRNPH2H7BZ11 118 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 ADAM10O14672 748 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 SYT7O43581 403 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 FOXS1O43638 330 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 OR2C1O95371 312 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 F13BP05160 661 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 FCARP24071 287 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 AKR1C3P42330 323 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 SLC26A5P58743 744 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 QRFPP83859 136 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 MIDNQ504T8 468 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 GKN2Q86XP6 184 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 ARHGEF39Q8N4T4 335 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 OR10H5Q8NGA6 315 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 OR4D6Q8NGJ1 314 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 OR52N5Q8NH56 324 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 MAFIPQ8WZ33 124 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 ANKRD9Q96BM1 317 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-208ENST00000506368 MOGAT1Q96PD6 335 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 SLC5A6Q9Y289 635 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 HDGFL3Q9Y3E1 203 aa14.17□□□□□ -0.14
SCLT1-208ENST00000506368 WIPF3A6NGB9 483 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 PRRT4C9JH25 899 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 SRSF10O75494 262 aaKnown RBP14.16□□□□□ -0.14
SCLT1-208ENST00000506368 HLA-DQA2P01906 255 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 CEACAM5P06731 702 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 THBS4P35443 961 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 SPOCK1Q08629 439 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 BIKQ13323 160 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 CA13Q8N1Q1 262 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 OR8G5Q8NG78 346 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 GALNT14Q96FL9 552 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 C5orf34Q96MH7 638 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 ZFYVE21Q9BQ24 234 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 EIF5A2Q9GZV4 153 aaKnown RBP14.16□□□□□ -0.14
SCLT1-208ENST00000506368 SRMSQ9H3Y6 488 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 PRDM13Q9H4Q3 707 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 C1orf123Q9NWV4 160 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 VSX1Q9NZR4 365 aaPredicted RBP14.16□□□□□ -0.14
SCLT1-208ENST00000506368 C4orf47A7E2U8 309 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 H3BSH0 61 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 ADAP1O75689 374 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 PMP2P02689 132 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 SPCS3P61009 180 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 PTCRAQ6ISU1 281 aaPredicted RBP14.16□□□□□ -0.14
SCLT1-208ENST00000506368 LHFPL1Q86WI0 220 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 LSRQ86X29 649 aaPredicted RBP14.16□□□□□ -0.14
SCLT1-208ENST00000506368 OR51A2Q8NGJ7 313 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 EMG1Q92979 244 aaKnown RBP14.16□□□□□ -0.14
SCLT1-208ENST00000506368 OR10C1Q96KK4 312 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 C2orf88Q9BSF0 95 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 RAB33BQ9H082 229 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 MBNL1Q9NR56 388 aaKnown RBP14.16□□□□□ -0.14
SCLT1-208ENST00000506368 FBXL17Q9UF56 701 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 TUBD1Q9UJT1 453 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 LRP12Q9Y561 859 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 SCN2AQ99250 2005 aa14.16□□□□□ -0.14
SCLT1-208ENST00000506368 SNRNP200O75643 2136 aaKnown RBP14.15□□□□□ -0.14
SCLT1-208ENST00000506368 LOC107986453A0A1B0GWG9 222 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 PRSS37A4D1T9 235 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 H7C1C5 153 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 POU2F2P09086 479 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 SPARCP09486 303 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 FCGR2CP31995 323 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 S100A10P60903 97 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 LCN6P62502 163 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 SUPT4H1P63272 117 aaKnown RBP14.15□□□□□ -0.14
SCLT1-208ENST00000506368 MFGE8Q08431 387 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-208ENST00000506368 SMAD4Q13485 552 aaKnown RBP14.15□□□□□ -0.14
SCLT1-208ENST00000506368 MED25Q71SY5 747 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 ZNF610Q8N9Z0 462 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 TMEM52Q8NDY8 209 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 OR4N2Q8NGD1 307 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 OR51F2Q8NH61 342 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 NRSN2Q9GZP1 204 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 CNTD2Q9H8S5 307 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 SIRT7Q9NRC8 400 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 DEC1Q9P2X7 70 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 TCFL5Q9UL49 500 aa14.15□□□□□ -0.14
SCLT1-208ENST00000506368 ZNF860A6NHJ4 632 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 TMEM14DPA8MWL7 114 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 DEDDO75618 318 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 MT-ATP6P00846 226 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 LMO1P25800 156 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 TAS2R46P59540 309 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 RPS23P62266 143 aaKnown RBP14.14□□□□□ -0.15
SCLT1-208ENST00000506368 UNC119Q13432 240 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 SSX2Q16385 188 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 RPUSD3Q6P087 351 aaKnown RBP14.14□□□□□ -0.15
SCLT1-208ENST00000506368 FIGLAQ6QHK4 219 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 ZNF615Q8N8J6 731 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 C19orf47Q8N9M1 422 aaKnown RBP14.14□□□□□ -0.15
SCLT1-208ENST00000506368 FLVCR1-AS1Q8TAF5 88 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 DOK4Q8TEW6 326 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 NKD1Q969G9 470 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 SCARF2Q96GP6 870 aaPredicted RBP14.14□□□□□ -0.15
SCLT1-208ENST00000506368 PRRX2Q99811 253 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 GINS3Q9BRX5 216 aa14.14□□□□□ -0.15
SCLT1-208ENST00000506368 ABHD6Q9BV23 337 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms