RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TSPO2Q5TGU0 170 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 BRICD5Q6PL45 260 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 FIP1L1Q6UN15 594 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 PARM1Q6UWI2 310 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 SHISA6Q6ZSJ9 500 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF765Q7L2R6 523 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 CPEB2Q7Z5Q1 589 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 SLC30A7Q8NEW0 376 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 FAM213BQ8TBF2 198 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 THAP3Q8WTV1 239 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 TOMM40LQ969M1 308 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ERGIC1Q969X5 290 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RAB7BQ96AH8 199 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 OR2A5Q96R48 311 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 SERINC2Q96SA4 455 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ABHD6Q9BV23 337 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RAB11FIP5Q9BXF6 653 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 FBXL17Q9UF56 701 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 GDF2Q9UK05 429 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 LINC01553A4QN01 128 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 CDRT15L2A8MXV6 281 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 WRBO00258 174 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 PHOX2AO14813 284 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 CELA2BP08218 269 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 SNRPCP09234 159 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 CSRP1P21291 193 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RPS4Y1P22090 263 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RIDAP52758 137 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 PRPS1P60891 318 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RPS15AP62244 130 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RPS4XP62701 263 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF74Q16587 644 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 FHL5Q5TD97 284 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 MED25Q71SY5 747 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 DCXRQ7Z4W1 244 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 AVL9Q8NBF6 648 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 C16orf52Q8NHV5 167 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RNF128Q8TEB7 428 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 MMABQ96EY8 250 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 FAM71F1Q96KD3 344 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 NMNAT2Q9BZQ4 307 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RTN4RQ9BZR6 473 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ALX4Q9H161 411 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 IL23AQ9NPF7 189 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 KCNJ16Q9NPI9 418 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 VSX1Q9NZR4 365 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 FBXL21Q9UKT6 434 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RHBDD3Q9Y3P4 386 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 B3GALT1Q9Y5Z6 326 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 NUP210Q8TEM1 1887 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ESPL1Q14674 2120 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 CACNA1DQ01668 2161 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 SERINC4A6NH21 518 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF878C9JN71 531 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 K7EPK0 472 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RAB27BO00194 218 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 IL11P20809 199 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 BCKDHBP21953 392 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 PPP1CCP36873 323 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 DHPSP49366 369 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 NOVA1P51513 510 aaKnown RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 TMEM33P57088 247 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 EGR4Q05215 589 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 UNC119Q13432 240 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ACKR1Q16570 336 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 SKA3Q8IX90 412 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF595Q8IYB9 648 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 FAM71E2Q8N5Q1 922 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 C15orf54Q8N8G6 183 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 SUMF1Q8NBK3 374 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 DMBX1Q8NFW5 382 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 OTOSQ8NHW6 89 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 RLN3Q8WXF3 142 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ASB17Q8WXJ9 295 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 FGF14Q92915 247 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 TOX2Q96NM4 488 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ZFYVE21Q9BQ24 234 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ABHD14AQ9BUJ0 271 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF700Q9H0M5 742 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 C5orf66Q9H5L9 145 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 FBRSQ9HAH7 460 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 Q9N2J8 555 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 PDE7BQ9NP56 450 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 THAP10Q9P2Z0 257 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-208ENST00000504387 DNAJB11Q9UBS4 358 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 ZDHHC8Q9ULC8 765 aa6.8□□□□□ -1.32
NEDD9-208ENST00000504387 PLXNA2O75051 1894 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 FREM2Q5SZK8 3169 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 THSD7BQ9C0I4 1608 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 FAM221AA4D161 298 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 TGFBR3LH3BV60 316 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 SNAPC5O75971 98 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 DUS4LO95620 317 aaKnown RBP6.79□□□□□ -1.32
NEDD9-208ENST00000504387 AMY2BP19961 511 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 C5AR1P21730 350 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 RPL12P30050 165 aaKnown RBP6.79□□□□□ -1.32
NEDD9-208ENST00000504387 FBXW4P57775 412 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 FXYD4P59646 89 aa6.79□□□□□ -1.32
NEDD9-208ENST00000504387 CSNK2A1P68400 391 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-208ENST00000504387 SLC35D3Q5M8T2 416 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms