RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 CD300LBA8K4G0 201 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 IFNL4K9M1U5 179 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF593O00488 134 aaPredicted RBP11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 TNFRSF13BO14836 293 aaPredicted RBP11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 FCN3O75636 299 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 LCATP04180 440 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF823P16415 610 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 GRK5P34947 590 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 SRP9P49458 86 aaKnown RBP11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 PAX8Q06710 450 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF154Q13106 437 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 MPPED2Q15777 294 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 LRRC36Q1X8D7 754 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF404Q494X3 552 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 KLHL12Q53G59 568 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF841Q6ZN19 808 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 TIGD4Q8IY51 512 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 KLHL36Q8N4N3 616 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 GIPC3Q8TF64 312 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 SLAMF6Q96DU3 332 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 KCNJ15Q99712 375 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 TMEM246Q9BRR3 403 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 NTN4Q9HB63 628 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 TMEM100Q9NV29 134 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF319Q9P2F9 582 aa11.7□□□□□ -0.54
PDLIM7-211ENST00000504318 FAM20BO75063 409 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 CST1P01037 141 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 SLC2A1P11166 492 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 FMO3P31513 532 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 PRAMEF6Q5VXH4 476 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 SHQ1Q6PI26 577 aaKnown RBP11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 PGAP1Q75T13 922 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 KLBQ86Z14 1044 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 MUC20Q8N307 709 aaPredicted RBP11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 ZDHHC22Q8N966 263 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 RNF133Q8WVZ7 376 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 SPTSSAQ969W0 71 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 C1orf147Q96MC9 270 aaPredicted RBP11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 SLC6A7Q99884 636 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 DNAJB9Q9UBS3 223 aa11.69□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF878C9JN71 531 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 RGS9O75916 674 aaPredicted RBP11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 SPARCP09486 303 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 SLC2A5P22732 501 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 CA6P23280 308 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 CPT2P23786 658 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 CD80P33681 288 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 PSMB10P40306 273 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 OPRL1P41146 370 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 COMPP49747 757 aaPredicted RBP11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 CDK5Q00535 292 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 LYPD2Q6UXB3 125 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 ZBTB49Q6ZSB9 765 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 DPY19L4Q7Z388 723 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 AMIGO2Q86SJ2 522 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 NANPQ8TBE9 248 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 ERGIC1Q969X5 290 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 OSBPL10Q9BXB5 764 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 SEMA6AQ9H2E6 1030 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 OCEL1Q9H607 264 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 MRPL15Q9P015 296 aaKnown RBP11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 RAB26Q9ULW5 256 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 PCDHB10Q9UN67 800 aa11.68□□□□□ -0.54
PDLIM7-211ENST00000504318 hCG_38984A0A1B0GV85 526 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 GLCEO94923 617 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF3P17036 446 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 PRKACGP22612 351 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 PRKXP51817 358 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 AQP4P55087 323 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 FAM3AP98173 230 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 MALLQ13021 153 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 RHOUQ7L0Q8 258 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 MRPL21Q7Z2W9 205 aaKnown RBP11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 WDR86Q86TI4 376 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 C11orf53Q8IXP5 236 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 TEX29Q8N6K0 151 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 C19orf18Q8NEA5 215 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 OR56B2PQ8NGI1 322 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 OR6K6Q8NGW6 343 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 FAM216AQ8WUB2 273 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 SGK3Q96BR1 496 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 ZNF48Q96MX3 618 aaPredicted RBP11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 COPS4Q9BT78 406 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 ABHD6Q9BV23 337 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 PPP1R3EQ9H7J1 279 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 PDP1Q9P0J1 537 aaPredicted RBP11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 CTSZQ9UBR2 303 aa11.67□□□□□ -0.54
PDLIM7-211ENST00000504318 IGHV2-70DA0A0C4DH43 119 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 SAC3D1A6NKF1 404 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 RIIAD1A6NNX1 92 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 GNGT2O14610 69 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 GMDSO60547 372 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 LHBP01229 141 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 IFNGP01579 166 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 PPIAL4GP0DN37 164 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 OSMP13725 252 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 BLVRAP53004 296 aa11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 GRB2P62993 217 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 EIF2B1Q14232 305 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-211ENST00000504318 GINS1Q14691 196 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms