RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 MPPED2Q15777 294 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 AANATQ16613 207 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 FAM76BQ5HYJ3 339 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 GLYATQ6IB77 296 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 BRICD5Q6PL45 260 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF771Q7L3S4 317 aaPredicted RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC36A1Q7Z2H8 476 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 MRPL21Q7Z2W9 205 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 JAZF1Q86VZ6 243 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 FTMTQ8N4E7 242 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 CYB561A3Q8NBI2 242 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 BHLHE23Q8NDY6 225 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 OR10Z1Q8NGY1 313 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 OR2T4Q8NH00 348 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 OR5R1Q8NH85 324 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 FANK1Q8TC84 345 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 FAM162AQ96A26 154 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 SLCO4A1Q96BD0 722 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 TSSK2Q96PF2 358 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 ERMAPQ96PL5 475 aaPredicted RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 NMNAT3Q96T66 252 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 KCNJ15Q99712 375 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 RBM4BQ9BQ04 359 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 KCTD14Q9BQ13 255 aaPredicted RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 ADAT1Q9BUB4 502 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 NSRP1Q9H0G5 558 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 TOR3AQ9H497 397 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 RGCCQ9H4X1 137 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 CNTD2Q9H8S5 307 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 SRA1Q9HD15 236 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 ABCB9Q9NP78 766 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 SPAG4Q9NPE6 437 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 FGFR1OP2Q9NVK5 253 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 MRPL22Q9NWU5 206 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNRD1Q9P1U0 126 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 FBLN5Q9UBX5 448 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 RPUSD1Q9UJJ7 312 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 VPREB3Q9UKI3 123 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 TMCC3Q9ULS5 477 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 PRPF19Q9UMS4 504 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 BAIAP2Q9UQB8 552 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 SOX21Q9Y651 276 aaPredicted RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 TGP01266 2768 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 TET2Q6N021 2002 aaPredicted RBP5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 IGHV3OR16-10A0A075B7F0 116 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 TRBV4-1A0A0J9YWV2 114 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 MDFIC2A0A1B0GVS7 189 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 M0R1W7 72 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 DVL1O14640 695 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 ADAM20O43506 726 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 GMNNO75496 209 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 FCN3O75636 299 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF205O95201 554 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 GADD45GO95257 159 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 SFTPBP07988 381 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 FBP1P09467 338 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 CA6P23280 308 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 OMGP23515 440 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 PRDX6P30041 224 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 NAA10P41227 235 aaPredicted RBP5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC15A1P46059 708 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 TGM4P49221 684 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 GRB2P62993 217 aaKnown RBP5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF92Q03936 586 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 ACSM1Q08AH1 577 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 GK3PQ14409 553 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 MEP1BQ16820 701 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 MICBQ29980 383 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 C2orf68Q2NKX9 166 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 SNAI3Q3KNW1 292 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 FBLN7Q53RD9 439 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 FAM201AQ5SY85 155 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 KPRPQ5T749 579 aaPredicted RBP5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 PRAMEF6Q5VXH4 476 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 NCR3LG1Q68D85 454 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 CORO6Q6QEF8 472 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 Q6ZSV7 163 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 BTN2A1Q7KYR7 527 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 REC114Q7Z4M0 266 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 NAA40Q86UY6 237 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 FAM90A1Q86YD7 464 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 ZDHHC21Q8IVQ6 265 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 C11orf53Q8IXP5 236 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 CMTM4Q8IZR5 234 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 LNX2Q8N448 690 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 CSNK2A3Q8NEV1 391 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 OR52H1Q8NGJ2 320 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 CMTM5Q96DZ9 223 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 PYURFQ96I23 114 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 TECTBQ96PL2 329 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 CCT8L2Q96SF2 557 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 PCGF1Q9BSM1 259 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 NMNAT2Q9BZQ4 307 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 RERGLQ9H628 205 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 RANBP3Q9H6Z4 567 aaPredicted RBP5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 WDR76Q9H967 626 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 MARCH7Q9H992 704 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 SMURF1Q9HCE7 757 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 IL1RAPQ9NPH3 570 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 RPRD1BQ9NQG5 326 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms