RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 FGL1Q08830 312 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 GK2Q14410 553 aaPredicted RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 OPCMLQ14982 345 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 GRK1Q15835 563 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 PNLIPRP3Q17RR3 467 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 ESCO2Q56NI9 601 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 TCEAL6Q6IPX3 200 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 FAHD2BQ6P2I3 314 aaPredicted RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 FJX1Q86VR8 437 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 ZNF101Q8IZC7 436 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 OR8H3Q8N146 312 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 ACBD4Q8NC06 268 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 CHST4Q8NCG5 386 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 OR9K2Q8NGE7 335 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 OR10R2Q8NGX6 335 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 ANGPTL6Q8NI99 470 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 ELMOD3Q96FG2 381 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 CPNE2Q96FN4 548 aaPredicted RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 FAHD2AQ96GK7 314 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 PGAM5Q96HS1 289 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 URM1Q9BTM9 101 aaKnown RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 EDEM2Q9BV94 578 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 GPR84Q9NQS5 396 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 KLK13Q9UKR3 277 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 MRPS28Q9Y2Q9 187 aaKnown RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 CNOT1A5YKK6 2376 aaKnown RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 GOSR2O14653 212 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 RER1O15258 196 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 MTRF1O75570 445 aaKnown RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 OPN1LWP04000 364 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 CELA2AP08217 269 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 HCKP08631 526 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 OR4E1P0C645 316 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 CBX5P45973 191 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 SEC61A1P61619 476 aaKnown RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 ECH1Q13011 328 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 UNC119Q13432 240 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 SGCAQ16586 387 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 CDNFQ49AH0 187 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 LIN54Q6MZP7 749 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 ANGPTL5Q86XS5 388 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 MUC20Q8N307 709 aaPredicted RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 C12orf45Q8N5I9 185 aaPredicted RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 OR56B1Q8NGI3 324 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 OR2I1PQ8NGU4 316 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 PP6455Q8WZ26 134 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 DVL3Q92997 716 aaPredicted RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 NKD1Q969G9 470 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 SPTSSAQ969W0 71 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 DPCDQ9BVM2 203 aaPredicted RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 ZNF416Q9BWM5 594 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 CST11Q9H112 138 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 PADI1Q9ULC6 663 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 FLVCR1Q9Y5Y0 555 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 AUP1Q9Y679 476 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 PATE3B3GLJ2 98 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 DHHO43323 396 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 RP2O75695 350 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 IGLV3-1P01715 115 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 ZNF735P0CB33 412 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 AGTR1P30556 359 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 TAS2R31P59538 309 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 RAC3P60763 192 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 HIST1H3AP68431 136 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 FOXK1P85037 733 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 MFAP5Q13361 173 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 EXOSC2Q13868 293 aaKnown RBP10.57□□□□□ -0.72
NUP54-202ENST00000502850 MOGAT2Q3SYC2 334 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 HIST2H3PS2Q5TEC6 136 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 RTL6Q6ICC9 239 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 OR10K2Q6IF99 312 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 HIST2H3AQ71DI3 136 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 FAM57BQ71RH2 274 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 TMEM123Q8N131 208 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 GALNT16Q8N428 558 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 PAQR4Q8N4S7 273 aaPredicted RBP10.57□□□□□ -0.72
NUP54-202ENST00000502850 OR52B4Q8NGK2 314 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 FAM71F1Q96KD3 344 aaPredicted RBP10.57□□□□□ -0.72
NUP54-202ENST00000502850 JSRP1Q96MG2 331 aaPredicted RBP10.57□□□□□ -0.72
NUP54-202ENST00000502850 GPER1Q99527 375 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 TMEM59Q9BXS4 323 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 ULBP2Q9BZM5 246 aa10.57□□□□□ -0.72
NUP54-202ENST00000502850 TINAGL1Q9GZM7 467 aaPredicted RBP10.57□□□□□ -0.72
NUP54-202ENST00000502850 MRPS18CQ9Y3D5 142 aaKnown RBP10.57□□□□□ -0.72
NUP54-202ENST00000502850 LNP1A1A4G5 178 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 DHRS7CA6NNS2 312 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 M0QYG6 137 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 ZIC3O60481 467 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 RAMP1O60894 148 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 DHRS3O75911 302 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 STK17BO94768 372 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 IFNA6P05013 189 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 ZNF35P13682 527 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 PRF1P14222 555 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 SSTR2P30874 369 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 S100A11P31949 105 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 ALDH3B1P43353 468 aa10.56□□□□□ -0.72
NUP54-202ENST00000502850 MRPS34P82930 218 aaKnown RBP10.56□□□□□ -0.72
NUP54-202ENST00000502850 SSPNQ14714 243 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms