RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-219	ENST00000502751	OR52H1	Q8NGJ2	320 aa		13.9	□□□□□ -0.18
LMNA-219	ENST00000502751	RDH12	Q96NR8	316 aa		13.9	□□□□□ -0.18
LMNA-219	ENST00000502751	REPIN1	Q9BWE0	567 aa	Known RBP	13.9	□□□□□ -0.18
LMNA-219	ENST00000502751	MRO	Q9BYG7	248 aa		13.9	□□□□□ -0.18
LMNA-219	ENST00000502751	G6PC2	Q9NQR9	355 aa		13.9	□□□□□ -0.18
LMNA-219	ENST00000502751	DCAF16	Q9NXF7	216 aa		13.9	□□□□□ -0.18
LMNA-219	ENST00000502751	METRN	Q9UJH8	293 aa		13.9	□□□□□ -0.18
LMNA-219	ENST00000502751	NOP16	Q9Y3C1	178 aa	Known RBP	13.9	□□□□□ -0.18
LMNA-219	ENST00000502751	CCDC182	A6NF36	153 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	MPZL2	O60487	215 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	AVP	P01185	164 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	IGHV2-5	P01817	119 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	ANXA2	P07355	339 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	MRPL3	P09001	348 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	TNFRSF1A	P19438	455 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	CFL1	P23528	166 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	ATP6V1E1	P36543	226 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	SLC3A1	Q07837	685 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	GK2	Q14410	553 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	HLX	Q14774	488 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	ZIK1	Q3SY52	487 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	LIPN	Q5VXI9	398 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	MEDAG	Q5VYS4	303 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	OR2T2	Q6IF00	324 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	NAA40	Q86UY6	237 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	RFLNB	Q8N5W9	214 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	OR8G5	Q8NG78	346 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	OR2Z1	Q8NG97	314 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	OR13G1	Q8NGZ3	307 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	RAB39B	Q96DA2	213 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	C19orf24	Q9BVV8	132 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	GMPPB	Q9Y5P6	360 aa		13.89	□□□□□ -0.19
LMNA-219	ENST00000502751	IQCF6	A8MYZ5	107 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	ZNF670-ZNF695	F2Z2N8	137 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751		M0R129	80 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	TBX1	O43435	398 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	TCF21	O43680	179 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	ZNF254	O75437	659 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	HTR1F	P30939	366 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	RCN1	Q15293	331 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	SLC29A1	Q99808	456 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	SLC22A4	Q9H015	551 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	OR10A2	Q9H208	303 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	RGCC	Q9H4X1	137 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	METTL17	Q9H7H0	456 aa	Predicted RBP	13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	TMEM106B	Q9NUM4	274 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	TMEM100	Q9NV29	134 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	N6AMT1	Q9Y5N5	214 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	FBN3	Q75N90	2809 aa		13.88	□□□□□ -0.19
LMNA-219	ENST00000502751	GGT3P	A6NGU5	568 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	ANKRD65	E5RJM6	399 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	SLC2A1	P11166	492 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	DDOST	P39656	456 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	SNRPG	P62308	76 aa	Known RBP	13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	SNCB	Q16143	134 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	TIGD6	Q17RP2	521 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	SNAI3	Q3KNW1	292 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	SLC25A30	Q5SVS4	291 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	PEG10	Q86TG7	708 aa	Known RBP	13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	SLC35F2	Q8IXU6	374 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	OR5AS1	Q8N127	324 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	PACRGL	Q8N7B6	248 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	ZNF555	Q8NEP9	628 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	PGAM5	Q96HS1	289 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751		Q96MT0	163 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	AMELY	Q99218	206 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	GAL3ST1	Q99999	423 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	CLN6	Q9NWW5	311 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	SMPD3	Q9NY59	655 aa	Predicted RBP	13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	DNAJC27	Q9NZQ0	273 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	IL19	Q9UHD0	177 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	NPTN	Q9Y639	398 aa		13.87	□□□□□ -0.19
LMNA-219	ENST00000502751	ISPD	A4D126	451 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	ERICH4	A6NGS2	130 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	ACOD1	A6NK06	481 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	PNP	P00491	289 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	SBK2	P0C263	348 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	DCTD	P32321	178 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	SRP9	P49458	86 aa	Known RBP	13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	ZNF121	P58317	390 aa	Predicted RBP	13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	PSMA6	P60900	246 aa	Known RBP	13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	ROM1	Q03395	351 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	GLYATL3	Q5SZD4	288 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	LRRN1	Q6UXK5	716 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	FAM57B	Q71RH2	274 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	ZNF679	Q8IYX0	411 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	OR51G2	Q8NGK0	314 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	ITLN1	Q8WWA0	313 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	MBOAT4	Q96T53	435 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	SLC30A2	Q9BRI3	323 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	TMPRSS13	Q9BYE2	586 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	OCEL1	Q9H607	264 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	DCLRE1B	Q9H816	532 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	ADGRL4	Q9HBW9	690 aa		13.86	□□□□□ -0.19
LMNA-219	ENST00000502751	UBAP1	Q9NZ09	502 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms