RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 VTCN1Q7Z7D3 282 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 KLHDC1Q8N7A1 406 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 LY6G5BQ8NDX9 201 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 OR4C13Q8NGP0 309 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 OR2AJ1Q8NGZ0 328 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DYDC1Q8WWB3 177 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 CFHR4Q92496 578 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 FAM46AQ96IP4 442 aaKnown RBP11.42□□□□□ -0.58
CCDC58-207ENST00000498466 CCL13Q99616 98 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 DUX4Q9UBX2 424 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 TMEM5Q9Y2B1 443 aa11.42□□□□□ -0.58
CCDC58-207ENST00000498466 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.41□□□□□ -0.58
CCDC58-207ENST00000498466 FAM220BPB1ANY3 271 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 H3BUX3 64 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 FXYD1O00168 92 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 PPP1R3DO95685 299 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 SAA4P35542 130 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 KIR2DS4P43632 304 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 RPS6KA3P51812 740 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 ZNF92Q03936 586 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 MZT1Q08AG7 82 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 MICBQ29980 383 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 NSUN5P1Q3KNT7 163 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 SLC18B1Q6NT16 456 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 LYG1Q8N1E2 194 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 LNX2Q8N448 690 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 PNKDQ8N490 385 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 OR2T12Q8NG77 320 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 OR4S1Q8NGB4 309 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 OR2AE1Q8NHA4 323 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 OR2T6Q8NHC8 308 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 PPP1R35Q8TAP8 253 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 STON2Q8WXE9 905 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 GPX7Q96SL4 187 aaPredicted RBP11.41□□□□□ -0.58
CCDC58-207ENST00000498466 SRA1Q9HD15 236 aaKnown RBP11.41□□□□□ -0.58
CCDC58-207ENST00000498466 MRPL15Q9P015 296 aaKnown RBP11.41□□□□□ -0.58
CCDC58-207ENST00000498466 SIGLEC7Q9Y286 467 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 PLXNB1O43157 2135 aa11.41□□□□□ -0.58
CCDC58-207ENST00000498466 IGLV1-36A0A0B4J1U3 117 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 M0R135 149 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 NDUFB3O43676 98 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 PTP4A3O75365 173 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 LHBP01229 141 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 VSIG10L2P0DP72 767 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 ELF3P78545 371 aaPredicted RBP11.4□□□□□ -0.58
CCDC58-207ENST00000498466 IKZF1Q13422 519 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 LY6EQ16553 131 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 PCK2Q16822 640 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 SNAI3Q3KNW1 292 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 WDR38Q5JTN6 314 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 DPY19L2P2Q6ZN68 376 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 SLC36A1Q7Z2H8 476 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 TSEN54Q7Z6J9 526 aaKnown RBP11.4□□□□□ -0.58
CCDC58-207ENST00000498466 FAM216BQ8N7L0 139 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 Q8N7P7 452 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 SLC26A10Q8NG04 563 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 ZNF799Q96GE5 643 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 CLPTM1LQ96KA5 538 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 C14orf119Q9NWQ9 140 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 B9D1Q9UPM9 204 aa11.4□□□□□ -0.58
CCDC58-207ENST00000498466 BHLHE40O14503 412 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 MRASO14807 208 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 ZNF682O95780 498 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 TXNDC12O95881 172 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 NPPAP01160 153 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 HLA-DQA2P01906 255 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 VSIG8P0DPA2 414 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 MUC1P15941 1255 aaPredicted RBP11.39□□□□□ -0.59
CCDC58-207ENST00000498466 GRK5P34947 590 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 UBE2E1P51965 193 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 ACSM1Q08AH1 577 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 RFX4Q33E94 735 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 SLC36A3Q495N2 470 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 OR6V1Q8N148 313 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 BEND2Q8NDZ0 799 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 LRRC29Q8WV35 223 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 H1FXQ92522 213 aaKnown RBP11.39□□□□□ -0.59
CCDC58-207ENST00000498466 SPTSSAQ969W0 71 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 PHF21AQ96BD5 680 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 RSRC1Q96IZ7 334 aaKnown RBP11.39□□□□□ -0.59
CCDC58-207ENST00000498466 DMRTB1Q96MA1 342 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 SSX3Q99909 188 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 TMEM120AQ9BXJ8 343 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 FAM234AQ9H0X4 552 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 PNRC2Q9NPJ4 139 aaKnown RBP11.39□□□□□ -0.59
CCDC58-207ENST00000498466 ADA2Q9NZK5 511 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 CYB5R1Q9UHQ9 305 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 PRPF19Q9UMS4 504 aaKnown RBP11.39□□□□□ -0.59
CCDC58-207ENST00000498466 MAB21L2Q9Y586 359 aa11.39□□□□□ -0.59
CCDC58-207ENST00000498466 A0A0G2JND7 137 aa11.38□□□□□ -0.59
CCDC58-207ENST00000498466 ACOT8O14734 319 aa11.38□□□□□ -0.59
CCDC58-207ENST00000498466 RENP00797 406 aa11.38□□□□□ -0.59
CCDC58-207ENST00000498466 TROVE2P10155 538 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC58-207ENST00000498466 FXYD6P3P58550 94 aa11.38□□□□□ -0.59
CCDC58-207ENST00000498466 IFI44LQ53G44 452 aa11.38□□□□□ -0.59
CCDC58-207ENST00000498466 LRRC10Q5BKY1 277 aa11.38□□□□□ -0.59
CCDC58-207ENST00000498466 GLYATL3Q5SZD4 288 aa11.38□□□□□ -0.59
CCDC58-207ENST00000498466 NCR3LG1Q68D85 454 aa11.38□□□□□ -0.59
CCDC58-207ENST00000498466 FKBP9P1Q75LS8 142 aa11.38□□□□□ -0.59
CCDC58-207ENST00000498466 CYP4Z1Q86W10 505 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms