RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 C1orf174Q8IYL3 243 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF295-AS1Q8N0V1 137 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 OR5AS1Q8N127 324 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 OR5AK2Q8NH90 309 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 SYNPRQ8TBG9 265 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 TSEN15Q8WW01 171 aaKnown RBP11.65□□□□□ -0.54
CPNE1-227ENST00000498056 UFD1Q92890 307 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 MRPL24Q96A35 216 aaKnown RBP11.65□□□□□ -0.54
CPNE1-227ENST00000498056 C14orf79Q96F83 325 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 LYZL4Q96KX0 146 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 DHRS9Q9BPW9 319 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 PDCD1LG2Q9BQ51 273 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 PLK3Q9H4B4 646 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 PLEKHA1Q9HB21 404 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 FAIMQ9NVQ4 179 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 MYEF2Q9P2K5 600 aaKnown RBP11.65□□□□□ -0.54
CPNE1-227ENST00000498056 SIRT4Q9Y6E7 314 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-227ENST00000498056 CRYBG3Q68DQ2 2970 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 AKAP6Q13023 2319 aa11.65□□□□□ -0.54
CPNE1-227ENST00000498056 A0A0U1RQV5 110 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 FAM221AA4D161 298 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 MAGEA13PA6NCF6 341 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 GGT3PA6NGU5 568 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 VSTM5A8MXK1 200 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 SYT7O43581 403 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 ZFPL1O95159 310 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 CELP19835 753 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 PCMT1P22061 227 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 CFL1P23528 166 aaKnown RBP11.64□□□□□ -0.55
CPNE1-227ENST00000498056 SSTR2P30874 369 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 CCR9P51686 369 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 BDH1Q02338 343 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 MLLT11Q13015 90 aaPredicted RBP11.64□□□□□ -0.55
CPNE1-227ENST00000498056 TSTQ16762 297 aaKnown RBP11.64□□□□□ -0.55
CPNE1-227ENST00000498056 NKPD1Q17RQ9 610 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 LIPKQ5VXJ0 399 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 MBNL2Q5VZF2 373 aaKnown RBP11.64□□□□□ -0.55
CPNE1-227ENST00000498056 OR2T2Q6IF00 324 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 FBXW12Q6X9E4 464 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 LRP11Q86VZ4 500 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 EGFL6Q8IUX8 553 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 MUC15Q8N387 334 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 OR56B2PQ8NGI1 322 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 SGK3Q96BR1 496 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 CMBLQ96DG6 245 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 OPALINQ96PE5 141 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 MGLLQ99685 303 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 SOX7Q9BT81 388 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 MRPS26Q9BYN8 205 aaKnown RBP11.64□□□□□ -0.55
CPNE1-227ENST00000498056 DYNLRB1Q9NP97 96 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 ZNF391Q9UJN7 358 aa11.64□□□□□ -0.55
CPNE1-227ENST00000498056 DCHS2Q6V1P9 2916 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 OR4C45A6NMZ5 311 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 INMTO95050 263 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 RAC2P15153 192 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 ZNF250P15622 560 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 ACHEP22303 614 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 TUBG1P23258 451 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 APOBEC3AP31941 199 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-227ENST00000498056 SERPINF1P36955 418 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 SELENOVP59797 346 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 SNRPD2P62316 118 aaKnown RBP11.63□□□□□ -0.55
CPNE1-227ENST00000498056 FAM3AP98173 230 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 ACSM1Q08AH1 577 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 TMEM255AQ5JRV8 349 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 UBE2UQ5VVX9 321 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 DMKNQ6E0U4 476 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-227ENST00000498056 DOK3Q7L591 496 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 RDH10Q8IZV5 341 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 OR13C3Q8NGS6 347 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 OR13C5Q8NGS8 318 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 OR10AC1Q8NH08 325 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 SPSB4Q96A44 273 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 TUBG2Q9NRH3 451 aa11.63□□□□□ -0.55
CPNE1-227ENST00000498056 PURGQ9UJV8 347 aaKnown RBP11.63□□□□□ -0.55
CPNE1-227ENST00000498056 PLSCR5A0PG75 271 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 OGG1O15527 345 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 DHRS3O75911 302 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 IGLV3-1P01715 115 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 SELEP16581 610 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 FAHP16930 419 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 TTKP33981 857 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 GSK3AP49840 483 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 PSG7Q13046 419 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 OR8B8Q15620 311 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 ARMCX4Q5H9R4 360 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 TMEM244Q5VVB8 128 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 ZNF611Q8N823 705 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 OR51A4Q8NGJ6 313 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 RPS4Y2Q8TD47 263 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 RGP1Q92546 391 aaPredicted RBP11.62□□□□□ -0.55
CPNE1-227ENST00000498056 GTF3AQ92664 365 aaKnown RBP11.62□□□□□ -0.55
CPNE1-227ENST00000498056 PGLYRP3Q96LB9 341 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 TMED9Q9BVK6 235 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 REPIN1Q9BWE0 567 aaKnown RBP11.62□□□□□ -0.55
CPNE1-227ENST00000498056 PAPOLGQ9BWT3 736 aaKnown RBP11.62□□□□□ -0.55
CPNE1-227ENST00000498056 TAAR3PQ9P1P4 343 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 HHLA2Q9UM44 414 aa11.62□□□□□ -0.55
CPNE1-227ENST00000498056 IGLV3-9A0A075B6K5 115 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms