RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 C11orf71Q6IPW1 123 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 PRSS48Q7RTY5 328 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 DTX2Q86UW9 622 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 ZCCHC24Q8N2G6 241 aaKnown RBP10.18□□□□□ -0.78
CUX1-210ENST00000497815 NANOGP1Q8N7R0 232 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 ZFP41Q8N8Y5 198 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 OR2G2Q8NGZ5 317 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 SPSB4Q96A44 273 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 LYZL4Q96KX0 146 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 VRK1Q99986 396 aaPredicted RBP10.18□□□□□ -0.78
CUX1-210ENST00000497815 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
CUX1-210ENST00000497815 MND1Q9BWT6 205 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 CDCA4Q9BXL8 241 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 YTHDF1Q9BYJ9 559 aaKnown RBP10.18□□□□□ -0.78
CUX1-210ENST00000497815 RGCCQ9H4X1 137 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 MSL2Q9HCI7 577 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 GPR84Q9NQS5 396 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 BABAM2Q9NXR7 383 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 ST6GALNAC2Q9UJ37 374 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 FBN2P35556 2912 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 TRBV2A0A0J9YWF9 115 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 A0A0U1RQV5 110 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 PNMA8CA0A1B0GUJ8 204 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 hCG_38984A0A1B0GV85 526 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 CD300LBA8K4G0 201 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 M0R233 179 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 LILRA1O75019 489 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 LALBAP00709 142 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 BMP4P12644 408 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 SELEP16581 610 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 CD53P19397 219 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 KITLGP21583 273 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 CFL1P23528 166 aaKnown RBP10.17□□□□□ -0.78
CUX1-210ENST00000497815 EVX1P49640 407 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 GSK3AP49840 483 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 CHN2P52757 468 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 WNT4P56705 351 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 FAM3AP98173 230 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 MRPL28Q13084 256 aaKnown RBP10.17□□□□□ -0.78
CUX1-210ENST00000497815 ALKBH1Q13686 389 aaKnown RBP10.17□□□□□ -0.78
CUX1-210ENST00000497815 DOC2BQ14184 412 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 IRF3Q14653 427 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 MED22Q15528 200 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 MOGQ16653 247 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 RDH10Q8IZV5 341 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 ZNF676Q8N7Q3 588 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 OR56B2PQ8NGI1 322 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 OR5M11Q96RB7 305 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 TPK1Q9H3S4 243 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 OPA3Q9H6K4 179 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 TRIM36Q9NQ86 728 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 GPR160Q9UJ42 338 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 EDARQ9UNE0 448 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 PMF1-BGLAPU3KQ54 211 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 DCHS2Q6V1P9 2916 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 RAI1Q7Z5J4 1906 aaPredicted RBP10.17□□□□□ -0.78
CUX1-210ENST00000497815 CRYBG3Q68DQ2 2970 aa10.17□□□□□ -0.78
CUX1-210ENST00000497815 HEATR1Q9H583 2144 aaKnown RBP10.16□□□□□ -0.78
CUX1-210ENST00000497815 A0A1B0GVI7 797 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 LOC107986453A0A1B0GWG9 222 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 ZSCAN5BA6NJL1 495 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 IQCF6A8MYZ5 107 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 SPRY3O43610 288 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 UBCP0CG48 685 aaKnown RBP10.16□□□□□ -0.78
CUX1-210ENST00000497815 DNASE1P24855 282 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 TGM4P49221 684 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 ZNF81P51508 661 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 MMP15P51511 669 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 SLC3A1Q07837 685 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 SPHARQ15513 63 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 RNLSQ5VYX0 342 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 FDX2Q6P4F2 183 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 CDH24Q86UP0 819 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 ZNF485Q8NCK3 441 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 OR8G5Q8NG78 346 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 PIGTQ969N2 578 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 PDCD1LG2Q9BQ51 273 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 CXorf56Q9H5V9 222 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 ZNF391Q9UJN7 358 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 SIRT4Q9Y6E7 314 aaPredicted RBP10.16□□□□□ -0.78
CUX1-210ENST00000497815 CADP27708 2225 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 CELSR2Q9HCU4 2923 aa10.16□□□□□ -0.78
CUX1-210ENST00000497815 A0A1B0GTI1 187 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 A6NIN4 97 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 OR4C45A6NMZ5 311 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 SYT7O43581 403 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 LMX1BO60663 402 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 NDUFS7O75251 213 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 ZFPL1O95159 310 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 TNFAIP8O95379 198 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 HLA-DPB1P04440 258 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 HSMCR30P0CW71 290 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 CA6P23280 308 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 ACKR3P25106 362 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 MAP2K3P46734 347 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 PPOXP50336 477 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 CCR9P51686 369 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 TNK1Q13470 666 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 CDK5R1Q15078 307 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 TSTQ16762 297 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms