RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TGFBR3Q03167 851 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 ST3GAL4Q11206 333 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 PDIA2Q13087 525 aaKnown RBP4.83□□□□□ -1.64
BRCA1-224ENST00000497488 ASAH1Q13510 395 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 FHL1Q13642 323 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 IMPG1Q17R60 797 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF658Q5TYW1 1059 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-224ENST00000497488 GDPGP1Q6ZNW5 385 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 Q6ZT83 130 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 ENTHD1Q8IYW4 607 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 CA13Q8N1Q1 262 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 C2orf73Q8N5S3 287 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-224ENST00000497488 TMEM251Q8N6I4 163 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 ATP6V1C2Q8NEY4 427 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 OR4K2Q8NGD2 314 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 OR2A12Q8NGT7 310 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 OR8U1Q8NH10 309 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 MCOLN3Q8TDD5 553 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 AGAP11Q8TF27 550 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 CHCHD10Q8WYQ3 142 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-224ENST00000497488 ARPC1AQ92747 370 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 LGMNQ99538 433 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 OR1A1Q9P1Q5 309 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 SCN4AP35499 1836 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 ELP1O95163 1332 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 A0A0B4J2E0 115 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 A0A0G2JRQ6 117 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 A0A1B0GX12 115 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 WDR91A4D1P6 747 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 A6NDN8 102 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 NCBP2LA6PVI3 153 aaKnown RBP4.82□□□□□ -1.64
BRCA1-224ENST00000497488 MPTX1A8MV57 137 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 HIDE1A8MVS5 230 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 GABRPO00591 440 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 DPM1O60762 260 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 SEMA3DO95025 777 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 CXCR2P25025 360 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 SHC1P29353 583 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 FABP6P51161 128 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 SNRPD1P62314 119 aaKnown RBP4.82□□□□□ -1.64
BRCA1-224ENST00000497488 REEP5Q00765 189 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 ACVR1Q04771 509 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 PRKCDQ05655 676 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 DPTQ07507 201 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 RAB31Q13636 194 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 CASP8Q14790 479 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 GPNMBQ14956 572 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 SLC10A1Q14973 349 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 LTB4RQ15722 352 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 SMUG1Q53HV7 270 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 UBE2UQ5VVX9 321 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 C11orf71Q6IPW1 123 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 PWWP2BQ6NUJ5 590 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 NIPAL1Q6NVV3 410 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 PRSS57Q6UWY2 283 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 C12orf54Q6X4T0 127 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 MBOAT2Q6ZWT7 520 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 MRPL52Q86TS9 123 aaKnown RBP4.82□□□□□ -1.64
BRCA1-224ENST00000497488 APLFQ8IW19 511 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-224ENST00000497488 OR5D18Q8NGL1 313 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 OR5M1Q8NGP8 315 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 SFXN5Q8TD22 340 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 RCN3Q96D15 328 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 PIK3IP1Q96FE7 263 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 NOL4LQ96MY1 436 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-224ENST00000497488 MBOAT7Q96N66 472 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 SELENOIQ9C0D9 397 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 TOLLIPQ9H0E2 274 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 OR51V1Q9H2C8 321 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 REEP1Q9H902 201 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 SLC40A1Q9NP59 571 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 NDE1Q9NXR1 346 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 CALYQ9NYX4 217 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 IL37Q9NZH6 218 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 TFR2Q9UP52 801 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 KLF12Q9Y4X4 402 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 POLR3HQ9Y535 204 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-224ENST00000497488 V9GY05 133 aa4.82□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF609O15014 1411 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 A0A0G2JLM5 398 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 KIR2DL5BA0A0G2JN68 375 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 KIR2DL5BA0A0G2JPC4 375 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 RBMY1BA6NDE4 496 aaKnown RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 RBMY1EA6NEQ0 496 aaKnown RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF233A6NK53 670 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF726A6NNF4 738 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 VGLL3A8MV65 326 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 SLC31A1O15431 190 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 ATP8B1O43520 1251 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 FGF17O60258 216 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 CDC40O60508 579 aaKnown RBP eCLIP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 SLC16A7O60669 478 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 VAMP5O95183 116 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 MPZL1O95297 269 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 UTS2O95399 124 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 HPRT1P00492 218 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 RENP00797 406 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 CD3GP09693 182 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms