RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 OR8U9P0C7N5 309 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 GOLGA8HP0CJ92 632 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 GZMAP12544 262 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 MUC1P15941 1255 aaPredicted RBP2.42□□□□□ -2.02
SMC4-225ENST00000497203 TCP1P17987 556 aaKnown RBP2.42□□□□□ -2.02
SMC4-225ENST00000497203 SRMP19623 302 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 PMCHP20382 165 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 BMI1P35226 326 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 GFERP55789 205 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 TAS2R39P59534 338 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 CACNG7P62955 275 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 LCN2P80188 198 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 PPIDQ08752 370 aaKnown RBP2.42□□□□□ -2.02
SMC4-225ENST00000497203 MLIPQ5VWP3 458 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 TMPRSS11AQ6ZMR5 421 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 RTL4Q6ZR62 310 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 LGI3Q8N145 548 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 TRAM1L1Q8N609 369 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 GPR26Q8NDV2 337 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 TMEM104Q8NE00 496 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 OR5AR1Q8NGP9 310 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 OR6N1Q8NGY5 312 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 ASZ1Q8WWH4 475 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 BCL7BQ9BQE9 202 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 UQCC2Q9BRT2 126 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 AGMATQ9BSE5 352 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 SAMD10Q9BYL1 202 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 RRAGDQ9NQL2 400 aaPredicted RBP2.42□□□□□ -2.02
SMC4-225ENST00000497203 ENOPH1Q9UHY7 261 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 TSSC4Q9Y5U2 329 aaPredicted RBP2.42□□□□□ -2.02
SMC4-225ENST00000497203 RFNGQ9Y644 331 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 COMMD3-BMI1R4GMX3 469 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 PCDH11XQ9BZA7 1347 aa2.42□□□□□ -2.02
SMC4-225ENST00000497203 DOCK8Q8NF50 2099 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 SMIM26A0A096LP01 95 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 GABRR3A8MPY1 467 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 HACD1B0YJ81 288 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 KRBOX1C9JBD0 128 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 H3BN98 237 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 TNFRSF11BO00300 401 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 ZNF207O43670 478 aaKnown RBP2.41□□□□□ -2.02
SMC4-225ENST00000497203 EIF1BO60739 113 aaKnown RBP2.41□□□□□ -2.02
SMC4-225ENST00000497203 SNAI1O95863 264 aaPredicted RBP2.41□□□□□ -2.02
SMC4-225ENST00000497203 PAHP00439 452 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 OTCP00480 354 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 PTHP01270 115 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 IL1RNP18510 177 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 NPY1RP25929 384 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 GABRR2P28476 465 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 PCK1P35558 622 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 MYCNOSP40205 109 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 OPRK1P41145 380 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 EIF1P41567 113 aaKnown RBP2.41□□□□□ -2.02
SMC4-225ENST00000497203 CXCL12P48061 93 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 LINC00315P59091 139 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 OR2B8PP59922 312 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 PNOCQ13519 176 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 STK38Q15208 465 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 RBMY1FQ15415 496 aaKnown RBP2.41□□□□□ -2.02
SMC4-225ENST00000497203 NKAIN1Q4KMZ8 207 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 ABCA11PQ4W5N1 156 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 KIF2BQ8N4N8 673 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 ARRDC1Q8N5I2 433 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 OR52K1Q8NGK4 314 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 OR9A2Q8NGT5 310 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 LINC01560Q8TB33 94 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 L3HYPDHQ96EM0 354 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 SCGB3A2Q96PL1 93 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 DOK1Q99704 481 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 TBL1YQ9BQ87 522 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 EXOSC4Q9NPD3 245 aaKnown RBP2.41□□□□□ -2.02
SMC4-225ENST00000497203 IFNKQ9P0W0 207 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 OPN4Q9UHM6 478 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 MROH7Q68CQ1 1323 aa2.41□□□□□ -2.02
SMC4-225ENST00000497203 NEURL4Q96JN8 1562 aa2.4□□□□□ -2.02
SMC4-225ENST00000497203 A0A0J9YYE9 177 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 A0A1W2PRF3 423 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 A0A1W2PRM7 423 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 TMEM150BA6NC51 233 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 H0YJW9 148 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 GLSO94925 669 aaPredicted RBP2.4□□□□□ -2.03
SMC4-225ENST00000497203 LCA5LO95447 670 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 OXTP01178 125 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 IGHV3-11P01762 117 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 TRBC1P01850 177 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 MBP02144 154 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 CATP04040 527 aaKnown RBP2.4□□□□□ -2.03
SMC4-225ENST00000497203 LINC00869P0C866 280 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 GABRG2P18507 467 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 TUBG1P23258 451 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 OR1G1P47890 313 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 NDUFA8P51970 172 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 TAS2R31P59538 309 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 ATP6V0D1P61421 351 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 IFITM3Q01628 133 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 CYP24A1Q07973 514 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 PIGHQ14442 188 aaPredicted RBP2.4□□□□□ -2.03
SMC4-225ENST00000497203 COX19Q49B96 90 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 KHDRBS2Q5VWX1 349 aaKnown RBP2.4□□□□□ -2.03
SMC4-225ENST00000497203 SAXO2Q658L1 398 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms