RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CENPMQ9NSP4 180 aa11.91□□□□□ -0.5
VTI1A-209ENST00000496445 MRPL15Q9P015 296 aaKnown RBP11.91□□□□□ -0.5
VTI1A-209ENST00000496445 ARRDC5A6NEK1 342 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 GGT3PA6NGU5 568 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 RIIAD1A6NNX1 92 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 IFNGP01579 166 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 IRF2P14316 349 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 FPR2P25090 351 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 GRK5P34947 590 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 PITPNBP48739 271 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 CX3CR1P49238 355 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 EIF2B1Q14232 305 aaKnown RBP11.9□□□□□ -0.5
VTI1A-209ENST00000496445 GK3PQ14409 553 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 DCDC5Q6ZRR9 648 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 DPY19L4Q7Z388 723 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 PARP8Q8N3A8 854 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 OR8B3Q8NGG8 313 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 OR11L1Q8NGX0 322 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 TEX47Q8TBZ9 253 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 GIPC3Q8TF64 312 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 LRGUKQ96M69 825 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 OR8B2Q96RD0 313 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 AMELYQ99218 206 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 FEVQ99581 238 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 CHID1Q9BWS9 393 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 MARCH7Q9H992 704 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 CTSZQ9UBR2 303 aa11.9□□□□□ -0.5
VTI1A-209ENST00000496445 SOX21Q9Y651 276 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-209ENST00000496445 IGHV3OR16-10A0A075B7F0 116 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 DNAJC9-AS1A6NH13 148 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 C22orf46C9J442 243 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 PHYHO14832 338 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 GMDSO60547 372 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 CST1P01037 141 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 PPIAL4GP0DN37 164 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 PSMB10P40306 273 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 GRB2P62993 217 aaKnown RBP11.89□□□□□ -0.51
VTI1A-209ENST00000496445 TAF13Q15543 124 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 WDR25Q64LD2 544 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-209ENST00000496445 BTNL3Q6UXE8 466 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 LRRN1Q6UXK5 716 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 NLRC3Q7RTR2 1065 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 PRSS45Q7RTY3 260 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 ERI1Q8IV48 349 aaKnown RBP11.89□□□□□ -0.51
VTI1A-209ENST00000496445 TIGD4Q8IY51 512 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 OR6N2Q8NGY6 317 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 CANT1Q8WVQ1 401 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 RNF133Q8WVZ7 376 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 RAB40AQ8WXH6 277 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 GCDHQ92947 438 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-209ENST00000496445 UPRTQ96BW1 309 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 INTS14Q96SY0 518 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 THTPAQ9BU02 230 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 OPA3Q9H6K4 179 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 FN3KRPQ9HA64 309 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 RNF7Q9UBF6 113 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 CLN8Q9UBY8 286 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 NOP16Q9Y3C1 178 aaKnown RBP11.89□□□□□ -0.51
VTI1A-209ENST00000496445 N6AMT1Q9Y5N5 214 aa11.89□□□□□ -0.51
VTI1A-209ENST00000496445 TRAV40A0A0B4J280 105 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 KIR2DS1A0A191URI9 304 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 AQP12BA6NM10 295 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 H3BN98 237 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 TBX1O43435 398 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 XRCC2O43543 280 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 GLCEO94923 617 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 PLATP00750 562 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 ANXA2P07355 339 aaKnown RBP11.88□□□□□ -0.51
VTI1A-209ENST00000496445 GSTT1P30711 240 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 OPRL1P41146 370 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 BLVRAP53004 296 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 FAM3AP98173 230 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 KLHL12Q53G59 568 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 AWAT1Q58HT5 328 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 SFRP4Q6FHJ7 346 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-209ENST00000496445 ZNF826PQ6ZT77 177 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 C9orf139Q6ZV77 190 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 SLC16A9Q7RTY1 509 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 WDR86Q86TI4 376 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 AQP12AQ8IXF9 295 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 HS3ST5Q8IZT8 346 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 GCSAMQ8N6F7 178 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 PLPP7Q8NBV4 271 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 PLEKHA8Q96JA3 519 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 DUX5Q96PT3 197 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 NUDT16L1Q9BRJ7 211 aaKnown RBP11.88□□□□□ -0.51
VTI1A-209ENST00000496445 ABHD6Q9BV23 337 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 TOR3AQ9H497 397 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 C1orf123Q9NWV4 160 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 DNAJC27Q9NZQ0 273 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 PDP1Q9P0J1 537 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-209ENST00000496445 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 MEGF8Q7Z7M0 2845 aa11.88□□□□□ -0.51
VTI1A-209ENST00000496445 hCG_38984A0A1B0GV85 526 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 C3orf80F5H4A9 247 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 LGALS8O00214 317 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 TNFRSF13BO14836 293 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-209ENST00000496445 FCN3O75636 299 aa11.87□□□□□ -0.51
VTI1A-209ENST00000496445 EGR1P18146 543 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms