RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 GID4Q8IVV7 300 aa12.13□□□□□ -0.47
CXCL12-208ENST00000496375 BPIFB2Q8N4F0 458 aa12.13□□□□□ -0.47
CXCL12-208ENST00000496375 ZNF454Q8N9F8 522 aa12.13□□□□□ -0.47
CXCL12-208ENST00000496375 OTOSQ8NHW6 89 aa12.13□□□□□ -0.47
CXCL12-208ENST00000496375 ZMYND19Q96E35 227 aaPredicted RBP12.13□□□□□ -0.47
CXCL12-208ENST00000496375 COG8Q96MW5 612 aa12.13□□□□□ -0.47
CXCL12-208ENST00000496375 TOR3AQ9H497 397 aa12.13□□□□□ -0.47
CXCL12-208ENST00000496375 PURGQ9UJV8 347 aaKnown RBP12.13□□□□□ -0.47
CXCL12-208ENST00000496375 SLC22A31A6NKX4 558 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 ZNF878C9JN71 531 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 SLC16A6O15403 523 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 FOXH1O75593 365 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 IGHV2-70P01814 119 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 SPARCP09486 303 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 SBK2P0C263 348 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 ACSM4P0C7M7 580 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 TNFSF4P23510 183 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 ZFP36P26651 326 aaKnown RBP12.12□□□□□ -0.47
CXCL12-208ENST00000496375 RPS27P42677 84 aaKnown RBP12.12□□□□□ -0.47
CXCL12-208ENST00000496375 CDC42P60953 191 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 SNRPGP62308 76 aaKnown RBP12.12□□□□□ -0.47
CXCL12-208ENST00000496375 TMED1Q13445 227 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 OGFRL1Q5TC84 451 aaPredicted RBP12.12□□□□□ -0.47
CXCL12-208ENST00000496375 Q6ZR03 302 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 MEPCEQ7L2J0 689 aaKnown RBP12.12□□□□□ -0.47
CXCL12-208ENST00000496375 DPY19L4Q7Z388 723 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.12□□□□□ -0.47
CXCL12-208ENST00000496375 ERI1Q8IV48 349 aaKnown RBP12.12□□□□□ -0.47
CXCL12-208ENST00000496375 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 OR2Z1Q8NG97 314 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 RNF133Q8WVZ7 376 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 C22orf15Q8WYQ4 148 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 SLC7A6Q92536 515 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 C1QTNF5Q9BXJ0 243 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 YIPF3Q9GZM5 350 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 ESM1Q9NQ30 184 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 SMPD3Q9NY59 655 aaPredicted RBP12.12□□□□□ -0.47
CXCL12-208ENST00000496375 STARD10Q9Y365 291 aa12.12□□□□□ -0.47
CXCL12-208ENST00000496375 M0R129 80 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 SELENOFO60613 162 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 FSHBP01225 129 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 DBHP09172 617 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 GABRB1P18505 474 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 TNFRSF1AP19438 455 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 KITLGP21583 273 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 PEX2P28328 305 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 KLHL12Q53G59 568 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 SLC16A9Q7RTY1 509 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 SPICQ8N5J4 248 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 ZNF283Q8N7M2 679 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 ZDHHC22Q8N966 263 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 OR6N2Q8NGY6 317 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 APOBEC3DQ96AK3 386 aaPredicted RBP12.11□□□□□ -0.47
CXCL12-208ENST00000496375 OTULINQ96BN8 352 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 CMBLQ96DG6 245 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 SLAMF6Q96DU3 332 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 IL4I1Q96RQ9 567 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 MNTQ99583 582 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 ABHD6Q9BV23 337 aa12.11□□□□□ -0.47
CXCL12-208ENST00000496375 PPIAL4EA0A075B759 164 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 PPIAL4CA0A0B4J2A2 164 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 PPIAL4DF5H284 164 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 PPIAL4FP0DN26 164 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 ALOX5APP20292 161 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 FPR2P25090 351 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 HTR1FP30939 366 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 OPRL1P41146 370 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 GRB2P62993 217 aaKnown RBP12.1□□□□□ -0.47
CXCL12-208ENST00000496375 EIF2B1Q14232 305 aaKnown RBP12.1□□□□□ -0.47
CXCL12-208ENST00000496375 OCLNQ16625 522 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 ZIK1Q3SY52 487 aaPredicted RBP12.1□□□□□ -0.47
CXCL12-208ENST00000496375 TMEM155Q4W5P6 130 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 DRAM2Q6UX65 266 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 FBXW12Q6X9E4 464 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 BCDIN3DQ7Z5W3 292 aaKnown RBP12.1□□□□□ -0.47
CXCL12-208ENST00000496375 KLHL36Q8N4N3 616 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 FAM81AQ8TBF8 368 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 ITLN1Q8WWA0 313 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 SPTSSAQ969W0 71 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 KCNJ15Q99712 375 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 PATZ1Q9HBE1 687 aaKnown RBP12.1□□□□□ -0.47
CXCL12-208ENST00000496375 ADGRL4Q9HBW9 690 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 MMP26Q9NRE1 261 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 FAM118AQ9NWS6 357 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 WARS2Q9UGM6 360 aaKnown RBP12.1□□□□□ -0.47
CXCL12-208ENST00000496375 IL19Q9UHD0 177 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 PPP1R3CQ9UQK1 317 aa12.1□□□□□ -0.47
CXCL12-208ENST00000496375 LOC100130705A0A1B0GUX0 176 aa12.09□□□□□ -0.47
CXCL12-208ENST00000496375 M0R135 149 aa12.09□□□□□ -0.47
CXCL12-208ENST00000496375 LYNP07948 512 aa12.09□□□□□ -0.47
CXCL12-208ENST00000496375 TPTEP56180 551 aa12.09□□□□□ -0.47
CXCL12-208ENST00000496375 SEC61A1P61619 476 aaKnown RBP12.09□□□□□ -0.47
CXCL12-208ENST00000496375 RPS7P62081 194 aaKnown RBP12.09□□□□□ -0.47
CXCL12-208ENST00000496375 BTG1P62324 171 aa12.09□□□□□ -0.47
CXCL12-208ENST00000496375 POU4F2Q12837 409 aa12.09□□□□□ -0.47
CXCL12-208ENST00000496375 ZMYND11Q15326 602 aa12.09□□□□□ -0.47
CXCL12-208ENST00000496375 ARMCX4Q5H9R4 360 aa12.09□□□□□ -0.47
CXCL12-208ENST00000496375 MEDAGQ5VYS4 303 aa12.09□□□□□ -0.47
CXCL12-208ENST00000496375 LPCAT4Q643R3 524 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms