RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 GRAMD2BQ96HH9 432 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 PRRC1Q96M27 445 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 FOXN4Q96NZ1 517 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 PRSS27Q9BQR3 290 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 C1QTNF4Q9BXJ3 329 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 REEP1Q9H902 201 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 SEBOXQ9HB31 216 aaPredicted RBP5.49□□□□□ -1.53
VIM-207ENST00000495528 VNN3Q9NY84 501 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 OSGIN1Q9UJX0 560 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 NOSIPQ9Y314 301 aaKnown RBP5.49□□□□□ -1.53
VIM-207ENST00000495528 TMED7Q9Y3B3 224 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 SAMHD1Q9Y3Z3 626 aaKnown RBP5.49□□□□□ -1.53
VIM-207ENST00000495528 YLPM1P49750 1951 aaKnown RBP5.49□□□□□ -1.53
VIM-207ENST00000495528 MALRD1Q5VYJ5 2156 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 IGKV3D-15A0A087WSY6 115 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 A0A087WUJ7 227 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 A0A087WUU8 490 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 A0A0B4J2E0 115 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 IGHV4-61A0A0C4DH41 118 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 TRBV4-1A0A0J9YWV2 114 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 A0A1B0GX12 115 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 TMEM72A0PK05 275 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 LIPT2A6NK58 231 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 PDLIM1O00151 329 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 SULT2B1O00204 365 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 FAAHO00519 579 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 TGFAP01135 160 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 CSF3P09919 207 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 THRBP10828 461 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 PNMTP11086 282 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 ZNF23P17027 643 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 CBLP22681 906 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 APOBEC1P41238 236 aaKnown RBP5.48□□□□□ -1.53
VIM-207ENST00000495528 POLR2HP52434 150 aaKnown RBP5.48□□□□□ -1.53
VIM-207ENST00000495528 BRWD1-AS2P59051 145 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
VIM-207ENST00000495528 IL1RL1Q01638 556 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 PDK3Q15120 406 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 TRIP10Q15642 601 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 MICAQ29983 383 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 OTUD3Q5T2D3 398 aaPredicted RBP5.48□□□□□ -1.53
VIM-207ENST00000495528 C9orf135Q5VTT2 229 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 LIPNQ5VXI9 398 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 OR7E24Q6IFN5 339 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 C3orf33Q6P1S2 294 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 ZNF730Q6ZMV8 503 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 WDR88Q6ZMY6 472 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 ZBTB49Q6ZSB9 765 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 GRINAQ7Z429 371 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 CDK20Q8IZL9 346 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 C10orf53Q8N6V4 93 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 OR4C15Q8NGM1 316 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 OR5K1Q8NHB7 308 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 SLC7A13Q8TCU3 470 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 GIPC3Q8TF64 312 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 TMEM239Q8WW34 195 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 ST8SIA1Q92185 356 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 APH1AQ96BI3 265 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 FBXO17Q96EF6 278 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 SLC29A1Q99808 456 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 CIB1Q99828 191 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 POLR2J2Q9GZM3 115 aaKnown RBP5.48□□□□□ -1.53
VIM-207ENST00000495528 POLR2J3Q9H1A7 115 aaKnown RBP5.48□□□□□ -1.53
VIM-207ENST00000495528 RNPEPL1Q9HAU8 725 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 SERINC1Q9NRX5 453 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 MAN2C1Q9NTJ4 1040 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 TAS2R16Q9NYV7 291 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 ZNF224Q9NZL3 707 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 C1RLQ9NZP8 487 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 PDP1Q9P0J1 537 aaPredicted RBP5.48□□□□□ -1.53
VIM-207ENST00000495528 STX18Q9P2W9 335 aaKnown RBP5.48□□□□□ -1.53
VIM-207ENST00000495528 PRDM4Q9UKN5 801 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 LYVE1Q9Y5Y7 322 aa5.48□□□□□ -1.53
VIM-207ENST00000495528 PLCE1Q9P212 2302 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 SAA2-SAA4A0A096LPE2 208 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 A0A1W2PRQ8 180 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 SH3PXD2BA1X283 911 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 LRP5LA4QPB2 252 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 A8MVM7 634 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 ATP6V1G2-DDX39BF2Z307 99 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 NDUFS8O00217 210 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 KPNA4O00629 521 aaPredicted RBP5.47□□□□□ -1.53
VIM-207ENST00000495528 CHP2O43745 196 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 OR10H3O60404 316 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 MRPL33O75394 65 aaKnown RBP5.47□□□□□ -1.53
VIM-207ENST00000495528 CCNB2O95067 398 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 IFI30P13284 250 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 DAOP14920 347 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 RPS5P46782 204 aaKnown RBP5.47□□□□□ -1.53
VIM-207ENST00000495528 UGT2B15P54855 530 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 CSNK2A1P68400 391 aaPredicted RBP5.47□□□□□ -1.53
VIM-207ENST00000495528 PRKCDQ05655 676 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 DGCR6Q14129 220 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 CARTPTQ16568 116 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 SYT14P1Q58G82 188 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 SHQ1Q6PI26 577 aaKnown RBP5.47□□□□□ -1.53
VIM-207ENST00000495528 MBOAT2Q6ZWT7 520 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 NRMQ8IXM6 262 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 ODF3L1Q8IXM7 274 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 RNF113BQ8IZP6 322 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms