RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 FOXJ3Q9UPW0 622 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 STRAPQ9Y3F4 350 aaKnown RBP17.28■□□□□ 0.36
COL27A1-207ENST00000494090 CDONQ4KMG0 1287 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 FAM27D1Q5T7N8 215 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 OR10Z1Q8NGY1 313 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 KISS1RQ969F8 398 aaPredicted RBP17.28■□□□□ 0.36
COL27A1-207ENST00000494090 PLEKHA2Q9HB19 425 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 TOR2AQ5JU69 321 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 TMEM182Q6ZP80 229 aaPredicted RBP17.28■□□□□ 0.36
COL27A1-207ENST00000494090 THNSL2Q86YJ6 484 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 GPX8Q8TED1 209 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 TMED6Q8WW62 240 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 C14orf79Q96F83 325 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 FBXO4Q9UKT5 387 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 A0A0B4J2E0 115 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 ZNF816-ZNF321PA0A0X1KG74 233 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 A0A1B0GX12 115 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 ZFP92A6NM28 416 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 ATP6V1G2-DDX39BF2Z307 99 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 PPM1DO15297 605 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 NME1P15531 152 aaKnown RBP17.28■□□□□ 0.36
COL27A1-207ENST00000494090 FCGR2CP31995 323 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 NDUFA6P56556 154 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 TSEN54Q7Z6J9 526 aaKnown RBP17.28■□□□□ 0.36
COL27A1-207ENST00000494090 OR4C16Q8NGL9 310 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 LRRC61Q9BV99 259 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 COMMD5Q9GZQ3 224 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 MGMTP16455 207 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 NOVA1P51513 510 aaKnown RBP17.27■□□□□ 0.36
COL27A1-207ENST00000494090 PDZK1IP1Q13113 114 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 HMGCLL1Q8TB92 370 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 RDH5Q92781 318 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 SPACA5Q96QH8 159 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 FAM173AQ9BQD7 235 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 HES7Q9BYE0 225 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 SIGLEC7Q9Y286 467 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 SDCBPO00560 298 aaPredicted RBP17.27■□□□□ 0.36
COL27A1-207ENST00000494090 PRKNO60260 465 aaPredicted RBP17.27■□□□□ 0.36
COL27A1-207ENST00000494090 MBP02144 154 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 GABRG2P18507 467 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 CRYBB2P43320 205 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 PCBP4P57723 403 aaKnown RBP17.27■□□□□ 0.36
COL27A1-207ENST00000494090 INSM1Q01101 510 aaPredicted RBP17.27■□□□□ 0.36
COL27A1-207ENST00000494090 HLA-BQ31612 363 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 ARHGEF39Q8N4T4 335 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 TMEM229BQ8NBD8 167 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 APH1BQ8WW43 257 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 MRPS24Q96EL2 167 aaKnown RBP17.27■□□□□ 0.36
COL27A1-207ENST00000494090 TAAR6Q96RI8 345 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 WNT16Q9UBV4 365 aa17.27■□□□□ 0.36
COL27A1-207ENST00000494090 GON4LQ3T8J9 2241 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 GPNMBQ14956 572 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 CARFQ8N187 725 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 ST8SIA4Q92187 359 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 ALG14Q96F25 216 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 RBM38Q9H0Z9 239 aaKnown RBP17.27■□□□□ 0.35
COL27A1-207ENST00000494090 ZNF331Q9NQX6 463 aaPredicted RBP17.27■□□□□ 0.35
COL27A1-207ENST00000494090 KLK11Q9UBX7 282 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 SLC17A2O00624 439 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 TNFSF11O14788 317 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 CCL7P80098 99 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 DUSP2Q05923 314 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 KHDC1LQ5JSQ8 128 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 OR10P1Q8NGE3 313 aa17.27■□□□□ 0.35
COL27A1-207ENST00000494090 APOBEC3DQ96AK3 386 aaPredicted RBP17.27■□□□□ 0.35
COL27A1-207ENST00000494090 ING1Q9UK53 422 aaPredicted RBP17.27■□□□□ 0.35
COL27A1-207ENST00000494090 WDR1O75083 606 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 NKX2-2O95096 273 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 RPL12P30050 165 aaKnown RBP17.26■□□□□ 0.35
COL27A1-207ENST00000494090 IL11RAQ14626 422 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 ZNF793Q6ZN11 406 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 TPPP3Q9BW30 176 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 GDF2Q9UK05 429 aaPredicted RBP17.26■□□□□ 0.35
COL27A1-207ENST00000494090 RNF24Q9Y225 148 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 A0A096LPE4 126 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 A0A1W2PPZ6 126 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 E5RGE8 158 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 PPP1R2P9O14990 202 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 RGS7BPQ6MZT1 257 aaPredicted RBP17.26■□□□□ 0.35
COL27A1-207ENST00000494090 CD300LDQ6UXZ3 194 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 GPR32P1Q8NGA4 272 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 ORAI1Q96D31 301 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 NEURL2Q9BR09 285 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 NSG2Q9Y328 171 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 FUT6P51993 359 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 BPIFB3P59826 476 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 FOXF1Q12946 379 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 MARCH1Q8TCQ1 289 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 C2orf50Q96LR7 162 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 NDFIP1Q9BT67 221 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 ST8SIA5O15466 376 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 IL5P05113 134 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 SLC25A1P53007 311 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 METAP1P53582 386 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 DTWD2Q8NBA8 298 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 NOXO1Q8NFA2 376 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 STRCQ7RTU9 1775 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 SHROOM3Q8TF72 1996 aa17.26■□□□□ 0.35
COL27A1-207ENST00000494090 ARPC3O15145 178 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms