RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 KIF2BQ8N4N8 673 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 ARIH2OSQ8N7S6 290 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 DUSP18Q8NEJ0 188 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 TCP10LQ8TDR4 215 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 EXOSC8Q96B26 276 aaKnown RBP4.08□□□□□ -1.76
SMC2-205ENST00000493955 DYNLL2Q96FJ2 89 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 ZNF317Q96PQ6 595 aaPredicted RBP4.08□□□□□ -1.76
SMC2-205ENST00000493955 GPR21Q99679 349 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 SIKE1Q9BRV8 207 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 CHAC1Q9BUX1 264 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 HAUS4Q9H6D7 363 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 ANAPC11Q9NYG5 84 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 MTFP1Q9UDX5 166 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 CELA1Q9UNI1 258 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 CLTCL1P53675 1640 aa4.08□□□□□ -1.76
SMC2-205ENST00000493955 LAMC1P11047 1609 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 NDUFS8O00217 210 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 SLC19A2O60779 497 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 CD3GP09693 182 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 RAB3AP20336 220 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 RAB5AP20339 215 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 P2RX1P51575 399 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 UBE2NP61088 152 aaKnown RBP4.07□□□□□ -1.76
SMC2-205ENST00000493955 ERCC8Q13216 396 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 TFDP2Q14188 446 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 RGNQ15493 299 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 C5orf64Q2M2E5 130 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 FAM83EQ2M2I3 478 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 ZNF829Q3KNS6 432 aaPredicted RBP4.07□□□□□ -1.76
SMC2-205ENST00000493955 SLC25A25Q6KCM7 469 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 SLC35D2Q76EJ3 337 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 PCP2Q8IVA1 136 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 FAM58AQ8N1B3 248 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 ARRDC1Q8N5I2 433 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 OR13C9Q8NGT0 318 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 ZFP90Q8TF47 636 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 LRRC39Q96DD0 335 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 BMFQ96LC9 184 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 SLC40A1Q9NP59 571 aa4.07□□□□□ -1.76
SMC2-205ENST00000493955 MN1Q10571 1320 aaPredicted RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 SYCE1LA8MT33 242 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 ANKRD65E5RJM6 399 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 ETHE1O95571 254 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 HOXC4P09017 264 aaPredicted RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 CCDC172P0C7W6 258 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 PGA5P0DJD9 388 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 GFAPP14136 432 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 HOXB8P17481 243 aaPredicted RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 PFN2P35080 140 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 CSNK1A1P48729 337 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 HCAR3P49019 387 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 CAPRIN1Q14444 709 aaKnown RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 ZNF266Q14584 549 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 ASCL4Q6XD76 172 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 FAM92BQ6ZTR7 304 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 MKXQ8IYA7 352 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 PRSS58Q8IYP2 241 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 METTL13Q8N6R0 699 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 ZNF433Q8N7K0 673 aaPredicted RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 OR5AR1Q8NGP9 310 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 ABHD3Q8WU67 409 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 CIDECQ96AQ7 238 aaPredicted RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 RNF145Q96MT1 663 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 TMEM175Q9BSA9 504 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 SAV1Q9H4B6 383 aaPredicted RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 EDA2RQ9HAV5 297 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 NOX3Q9HBY0 568 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 ZMAT5Q9UDW3 170 aaKnown RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 FLVCR2Q9UPI3 526 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 NEXMIFQ5QGS0 1516 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 ABCA3Q99758 1704 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 RPRD2Q5VT52 1461 aaKnown RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 CDK12Q9NYV4 1490 aaPredicted RBP4.06□□□□□ -1.76
SMC2-205ENST00000493955 LRP4O75096 1905 aa4.06□□□□□ -1.76
SMC2-205ENST00000493955 OR6C74A6NCV1 312 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 C11orf94C9JXX5 98 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 H3BN98 237 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 CATP04040 527 aaKnown RBP4.05□□□□□ -1.76
SMC2-205ENST00000493955 DNAH10OSP0CZ25 163 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 PGA4P0DJD7 388 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 PGA3P0DJD8 388 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 PSG2P11465 335 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 GABRG2P18507 467 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 CSKP41240 450 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 ZNF133P52736 654 aaPredicted RBP4.05□□□□□ -1.76
SMC2-205ENST00000493955 ARG2P78540 354 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 GCSAMLQ5JQS6 135 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 OR2W3Q7Z3T1 314 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 ARHGAP18Q8N392 663 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 Q8N976 141 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 ASCC1Q8N9N2 400 aaKnown RBP4.05□□□□□ -1.76
SMC2-205ENST00000493955 GATSQ8NAP1 163 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 C11orf72Q8NBR9 251 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 DCPSQ96C86 337 aaKnown RBP4.05□□□□□ -1.76
SMC2-205ENST00000493955 SGTBQ96EQ0 304 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 ZNF681Q96N22 645 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 UQCC2Q9BRT2 126 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 TM6SF2Q9BZW4 377 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 SPNS1Q9H2V7 528 aa4.05□□□□□ -1.76
SMC2-205ENST00000493955 RBAKQ9NYW8 714 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms