RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MOGAT3Q86VF5 341 aa19.05■□□□□ 0.64
SNIP1-203ENST00000493916 LRRC28Q86X40 367 aaPredicted RBP19.05■□□□□ 0.64
SNIP1-203ENST00000493916 ERGIC1Q969X5 290 aa19.05■□□□□ 0.64
SNIP1-203ENST00000493916 ADAT1Q9BUB4 502 aaKnown RBP19.05■□□□□ 0.64
SNIP1-203ENST00000493916 GABARAPL3Q9BY60 117 aa19.05■□□□□ 0.64
SNIP1-203ENST00000493916 DNAJC27Q9NZQ0 273 aa19.05■□□□□ 0.64
SNIP1-203ENST00000493916 LAMP5Q9UJQ1 280 aa19.05■□□□□ 0.64
SNIP1-203ENST00000493916 N6AMT1Q9Y5N5 214 aa19.05■□□□□ 0.64
SNIP1-203ENST00000493916 PLPP2O43688 288 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 FSTL3O95633 263 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 SBK2P0C263 348 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 CA6P23280 308 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 CFL1P23528 166 aaKnown RBP19.04■□□□□ 0.64
SNIP1-203ENST00000493916 RBMXP38159 391 aaKnown RBP19.04■□□□□ 0.64
SNIP1-203ENST00000493916 DDOSTP39656 456 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 MDH2P40926 338 aaKnown RBP19.04■□□□□ 0.64
SNIP1-203ENST00000493916 OR8G1Q15617 311 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 TIGD6Q17RP2 521 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 ZFP1Q6P2D0 407 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 FAM57BQ71RH2 274 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 KLBQ86Z14 1044 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.04■□□□□ 0.64
SNIP1-203ENST00000493916 OR56B2PQ8NGI1 322 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 ZNF420Q8TAQ5 688 aaPredicted RBP19.04■□□□□ 0.64
SNIP1-203ENST00000493916 TMEM163Q8TC26 289 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 Q8TCH9 128 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 OR10A2Q9H208 303 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 NIPAL2Q9H841 368 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 G6PC2Q9NQR9 355 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 UBAP1Q9NZ09 502 aa19.04■□□□□ 0.64
SNIP1-203ENST00000493916 LRRC30A6NM36 301 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 H3BNX3 289 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 PTBP3O95758 552 aaKnown RBP19.03■□□□□ 0.64
SNIP1-203ENST00000493916 PSMA6P60900 246 aaKnown RBP19.03■□□□□ 0.64
SNIP1-203ENST00000493916 FAM3AP98173 230 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 AADACL4Q5VUY2 407 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 NXNL2Q5VZ03 156 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 MUC20Q8N307 709 aaPredicted RBP19.03■□□□□ 0.64
SNIP1-203ENST00000493916 KLHL36Q8N4N3 616 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 TCEANCQ8N8B7 351 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 SGK3Q96BR1 496 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 REEP6Q96HR9 211 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 RBM4BQ9BQ04 359 aaKnown RBP19.03■□□□□ 0.64
SNIP1-203ENST00000493916 RGCCQ9H4X1 137 aa19.03■□□□□ 0.64
SNIP1-203ENST00000493916 ATRQ13535 2644 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 hCG_38984A0A1B0GV85 526 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 SAC3D1A6NKF1 404 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 SLC22A31A6NKX4 558 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 M0R129 80 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 CYB5R3P00387 301 aaPredicted RBP19.02■□□□□ 0.64
SNIP1-203ENST00000493916 PMELP40967 661 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 DEGS2Q6QHC5 323 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 LRRN1Q6UXK5 716 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 MEPCEQ7L2J0 689 aaKnown RBP19.02■□□□□ 0.64
SNIP1-203ENST00000493916 C1orf87Q8N0U7 546 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 SPERTQ8NA61 448 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 PLPP7Q8NBV4 271 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 PGAM5Q96HS1 289 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 CNN2Q99439 309 aaKnown RBP19.02■□□□□ 0.64
SNIP1-203ENST00000493916 PKP2Q99959 881 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 PATZ1Q9HBE1 687 aaKnown RBP19.02■□□□□ 0.64
SNIP1-203ENST00000493916 ZNF319Q9P2F9 582 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 PCDHB10Q9UN67 800 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 LRP12Q9Y561 859 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 TMEM14AQ9Y6G1 99 aa19.02■□□□□ 0.64
SNIP1-203ENST00000493916 IGHV3-64DA0A0J9YX35 117 aa19.01■□□□□ 0.63
SNIP1-203ENST00000493916 F5H0A9 414 aaPredicted RBP19.01■□□□□ 0.63
SNIP1-203ENST00000493916 PNPP00491 289 aa19.01■□□□□ 0.63
SNIP1-203ENST00000493916 MRPL3P09001 348 aaKnown RBP19.01■□□□□ 0.63
SNIP1-203ENST00000493916 KCTD18Q6PI47 426 aaPredicted RBP19.01■□□□□ 0.63
SNIP1-203ENST00000493916 ZNF771Q7L3S4 317 aaPredicted RBP19.01■□□□□ 0.63
SNIP1-203ENST00000493916 GID4Q8IVV7 300 aa19.01■□□□□ 0.63
SNIP1-203ENST00000493916 C10orf67Q8IYJ2 551 aa19.01■□□□□ 0.63
SNIP1-203ENST00000493916 BRD7Q9NPI1 651 aa19.01■□□□□ 0.63
SNIP1-203ENST00000493916 A0A0G2JMP0 313 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 A0A0X1KG70 313 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 ANKRD30BLA7E2S9 258 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 CPT2P23786 658 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 GSK3AP49840 483 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 HCCSP53701 268 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 ROM1Q03395 351 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 MZT1Q08AG7 82 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 PRAMEF6Q5VXH4 476 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 BCDIN3DQ7Z5W3 292 aaKnown RBP19■□□□□ 0.63
SNIP1-203ENST00000493916 KRT77Q7Z794 578 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 OR4M2Q8NGB6 313 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 OR11L1Q8NGX0 322 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 ASB17Q8WXJ9 295 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 RIBC2Q9H4K1 309 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 HAO2Q9NYQ3 351 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 H2AFY2Q9P0M6 372 aaPredicted RBP19■□□□□ 0.63
SNIP1-203ENST00000493916 ZNF391Q9UJN7 358 aa19■□□□□ 0.63
SNIP1-203ENST00000493916 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.99■□□□□ 0.63
SNIP1-203ENST00000493916 J3QLI3 93 aa18.99■□□□□ 0.63
SNIP1-203ENST00000493916 FAM20BO75063 409 aa18.99■□□□□ 0.63
SNIP1-203ENST00000493916 FOXH1O75593 365 aa18.99■□□□□ 0.63
SNIP1-203ENST00000493916 IRF2P14316 349 aa18.99■□□□□ 0.63
SNIP1-203ENST00000493916 GATA3P23771 443 aa18.99■□□□□ 0.63
SNIP1-203ENST00000493916 POLR2IP36954 125 aaKnown RBP18.99■□□□□ 0.63
SNIP1-203ENST00000493916 SRP14P37108 136 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms