RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ZNF717Q9BY31 904 aaPredicted RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 SLIRPQ9GZT3 109 aaKnown RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 TOLLIPQ9H0E2 274 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 MRM3Q9HC36 420 aaKnown RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 DOCK8Q8NF50 2099 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
SMC4-223ENST00000493695 IGKV1-27A0A075B6S5 117 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 A0A1B0GUH1 482 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 OR5H1A6NKK0 313 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 GABRR3A8MPY1 467 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 WRBO00258 174 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 GABRPO00591 440 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 HMMRO75330 724 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 GLAP06280 429 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 ZNF806P0C7X5 589 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 RFC3P40938 356 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 RPS15AP62244 130 aaKnown RBP1.85□□□□□ -2.11
SMC4-223ENST00000493695 PITPNAQ00169 270 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 MEF2BQ02080 365 aaPredicted RBP1.85□□□□□ -2.11
SMC4-223ENST00000493695 IRF8Q02556 426 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 IL18Q14116 193 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 RPEL1Q2QD12 228 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 MIR7-3HGQ8N6C7 128 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 GPR26Q8NDV2 337 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 C19orf18Q8NEA5 215 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 OR52K2Q8NGK3 314 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 OR9A2Q8NGT5 310 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 SGTBQ96EQ0 304 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 GPR21Q99679 349 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 TBL1YQ9BQ87 522 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 SULT4A1Q9BR01 284 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 MYOZ1Q9NP98 299 aaPredicted RBP1.85□□□□□ -2.11
SMC4-223ENST00000493695 RRAGDQ9NQL2 400 aaPredicted RBP1.85□□□□□ -2.11
SMC4-223ENST00000493695 ZNF257Q9Y2Q1 563 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 CBY1Q9Y3M2 126 aa1.85□□□□□ -2.11
SMC4-223ENST00000493695 SCN1AP35498 2009 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 SIGLEC1Q9BZZ2 1709 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 SMIM26A0A096LP01 95 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 ZNF233A6NK53 670 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 SYCE1LA8MT33 242 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 CASQ2O14958 399 aaPredicted RBP1.84□□□□□ -2.11
SMC4-223ENST00000493695 RAD1O60671 282 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 CDRT1O95170 752 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 PAHP00439 452 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 HLA-DQB1P01920 261 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 IFNW1P05000 195 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 IL4P05112 153 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 SFTPCP11686 197 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 GABRG2P18507 467 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 PPICP45877 212 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 RPS5P46782 204 aaKnown RBP1.84□□□□□ -2.11
SMC4-223ENST00000493695 PRLHRP49683 370 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 SERPINB8P50452 374 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 NDUFA8P51970 172 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 UBE2MP61081 183 aaKnown RBP1.84□□□□□ -2.11
SMC4-223ENST00000493695 RAD51Q06609 339 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 ZNF266Q14584 549 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 CLEC2AQ6UVW9 174 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 FAM122BQ7Z309 247 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 MICU2Q8IYU8 434 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 ZNF101Q8IZC7 436 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 COMMD1Q8N668 190 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 OR13G1Q8NGZ3 307 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 OR51F2Q8NH61 342 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 KCNS1Q96KK3 526 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 C9orf72Q96LT7 481 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 TMEM243Q9BU79 118 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 CHCHD7Q9BUK0 85 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 PLEKHF2Q9H8W4 249 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 BEX1Q9HBH7 125 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 CD209Q9NNX6 404 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 CCNB1IP1Q9NPC3 277 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 ENOPH1Q9UHY7 261 aa1.84□□□□□ -2.11
SMC4-223ENST00000493695 IGHV3OR16-8A0A075B7F1 116 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 IGKV3D-11A0A0A0MRZ8 115 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 A0A1W2PRD5 423 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 ANKRD65E5RJM6 399 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 TEX46H3BTG2 121 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 K7EM74 188 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 SLC16A7O60669 478 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 EIF1BO60739 113 aaKnown RBP1.83□□□□□ -2.12
SMC4-223ENST00000493695 DNAJB6O75190 326 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 CD37P11049 281 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 ANXA8P13928 327 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 EIF1P41567 113 aaKnown RBP1.83□□□□□ -2.12
SMC4-223ENST00000493695 RBMY1FQ15415 496 aaKnown RBP1.83□□□□□ -2.12
SMC4-223ENST00000493695 ZNF829Q3KNS6 432 aaPredicted RBP1.83□□□□□ -2.12
SMC4-223ENST00000493695 ANXA8L1Q5VT79 327 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 GUSBP11Q6P575 273 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 KATNAL2Q8IYT4 538 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 VKORC1L1Q8N0U8 176 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 CSGALNACT2Q8N6G5 542 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 TMEM105Q8N8V8 129 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 SNX31Q8N9S9 440 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 BPIFCQ8NFQ6 507 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 GLYATL2Q8WU03 294 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 FAM19A4Q96LR4 140 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 TEAD3Q99594 435 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 AGMATQ9BSE5 352 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 ZSCAN16Q9H4T2 348 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms