RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 DHRS1Q96LJ7 313 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 NSMCE2Q96MF7 247 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 WDFY2Q96P53 400 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 GORASP2Q9H8Y8 452 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 TNFRSF19Q9NS68 423 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 CLPSL1A2RUU4 121 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 TNFRSF13BO14836 293 aaPredicted RBP9.63□□□□□ -0.87
COL6A3-213ENST00000493475 TIPRLO75663 272 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 FUT4P22083 530 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 OMGP23515 440 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 EEF1B2P24534 225 aaKnown RBP9.63□□□□□ -0.87
COL6A3-213ENST00000493475 HSD11B1P28845 292 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 FMO3P31513 532 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 CFHR2P36980 270 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 GNALP38405 381 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 NAA10P41227 235 aaPredicted RBP9.63□□□□□ -0.87
COL6A3-213ENST00000493475 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL6A3-213ENST00000493475 TSPAN31Q12999 210 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 SEC23BQ15437 767 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 MICBQ29980 383 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 KRTAP27-1Q3LI81 207 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 SAMD4BQ5PRF9 694 aaKnown RBP9.63□□□□□ -0.87
COL6A3-213ENST00000493475 PRAMEF6Q5VXH4 476 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 CGB2Q6NT52 195 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 C8orf82Q6P1X6 216 aaPredicted RBP9.63□□□□□ -0.87
COL6A3-213ENST00000493475 GDPGP1Q6ZNW5 385 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 SLC36A1Q7Z2H8 476 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 CPLX4Q7Z7G2 160 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 NPRL2Q8WTW4 380 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 C7orf34Q96L11 122 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 DMRTB1Q96MA1 342 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 MMP27Q9H306 513 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 MARCH7Q9H992 704 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 IL1RAPQ9NPH3 570 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 MED4Q9NPJ6 270 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 C1orf123Q9NWV4 160 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 BAIAP2Q9UQB8 552 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 V9GYQ6 96 aa9.63□□□□□ -0.87
COL6A3-213ENST00000493475 A0A1B0GVI7 797 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 ANXA2P2A6NMY6 339 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 ZNF878C9JN71 531 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 DCTN6O00399 190 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 DIRAS1O95057 198 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 IFNGP01579 166 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 GRPP07492 148 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 MELTFP08582 738 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 MUC1P15941 1255 aaPredicted RBP9.62□□□□□ -0.87
COL6A3-213ENST00000493475 GRB2P62993 217 aaKnown RBP9.62□□□□□ -0.87
COL6A3-213ENST00000493475 GUCA2AQ02747 115 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 SPATS1Q496A3 300 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 CLEC12AQ5QGZ9 265 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 FAM201AQ5SY85 155 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 SFRP4Q6FHJ7 346 aaPredicted RBP9.62□□□□□ -0.87
COL6A3-213ENST00000493475 LYPD2Q6UXB3 125 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 DTX3Q8N9I9 347 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 WFDC12Q8WWY7 111 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 DACT3Q96B18 629 aaPredicted RBP9.62□□□□□ -0.87
COL6A3-213ENST00000493475 KCNJ15Q99712 375 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 TOR3AQ9H497 397 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 ABCB9Q9NP78 766 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 CD300AQ9UGN4 299 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 KPTNQ9Y664 436 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 CDH10Q9Y6N8 788 aa9.62□□□□□ -0.87
COL6A3-213ENST00000493475 ARHGAP32A7KAX9 2087 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 IGHV1-69DA0A0B4J2H0 117 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 MDFIC2A0A1B0GVS7 189 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 OR6C68A6NDL8 312 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 C22orf46C9J442 243 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 TBX1O43435 398 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 KCNAB3O43448 404 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 SASH3O75995 380 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 PTBP3O95758 552 aaKnown RBP9.61□□□□□ -0.87
COL6A3-213ENST00000493475 PAHP00439 452 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 IGHV1-69P01742 117 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 FBP1P09467 338 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 SPARCP09486 303 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 PMELP40967 661 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 FXYD6P3P58550 94 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 HNRNPA0Q13151 305 aaKnown RBP9.61□□□□□ -0.87
COL6A3-213ENST00000493475 BLMHQ13867 455 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 MPPED2Q15777 294 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 TIGD6Q17RP2 521 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 CDONQ4KMG0 1287 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 LRRC10Q5BKY1 277 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 SLC35F1Q5T1Q4 408 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 DCXRQ7Z4W1 244 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 ZDHHC21Q8IVQ6 265 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 LNX2Q8N448 690 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 KIR3DL3Q8N743 410 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 OR52H1Q8NGJ2 320 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 ST8SIA4Q92187 359 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 LHX4Q969G2 390 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 C12orf43Q96C57 262 aaKnown RBP9.61□□□□□ -0.87
COL6A3-213ENST00000493475 CHIAQ9BZP6 476 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 CNTD2Q9H8S5 307 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 RNPEPL1Q9HAU8 725 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 CENPMQ9NSP4 180 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 TBC1D23Q9NUY8 699 aa9.61□□□□□ -0.87
COL6A3-213ENST00000493475 C1RLQ9NZP8 487 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms