RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 SEC23BQ15437 767 aa17.64■□□□□ 0.41
PFDN4-205ENST00000493356 TEX36Q5VZQ5 186 aa17.64■□□□□ 0.41
PFDN4-205ENST00000493356 METAP1DQ6UB28 335 aaPredicted RBP17.64■□□□□ 0.41
PFDN4-205ENST00000493356 ZBTB46Q86UZ6 589 aa17.64■□□□□ 0.41
PFDN4-205ENST00000493356 OR2AE1Q8NHA4 323 aa17.64■□□□□ 0.41
PFDN4-205ENST00000493356 MAP6Q96JE9 813 aa17.64■□□□□ 0.41
PFDN4-205ENST00000493356 MRPL15Q9P015 296 aaKnown RBP17.64■□□□□ 0.41
PFDN4-205ENST00000493356 CAB39Q9Y376 341 aaPredicted RBP17.64■□□□□ 0.41
PFDN4-205ENST00000493356 TRBV4-1A0A0J9YWV2 114 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 hCG_1807616A0A1W2PRN6 198 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 GGT3PA6NGU5 568 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 GSTA4O15217 222 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 ALX3O95076 343 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 RENP00797 406 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 KPRPQ5T749 579 aaPredicted RBP17.63■□□□□ 0.41
PFDN4-205ENST00000493356 ARPINQ7Z6K5 226 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 SPERTQ8NA61 448 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 LY6G5BQ8NDX9 201 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 NPRL2Q8WTW4 380 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 RCN3Q96D15 328 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 RPRD1BQ9NQG5 326 aaKnown RBP17.63■□□□□ 0.41
PFDN4-205ENST00000493356 ONECUT1Q9UBC0 465 aa17.63■□□□□ 0.41
PFDN4-205ENST00000493356 A0A1B0GW55 424 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 HMGB1P1B2RPK0 211 aaPredicted RBP17.62■□□□□ 0.41
PFDN4-205ENST00000493356 ARPC3O15145 178 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 DUX4L2P0CJ85 424 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 DUX4L3P0CJ86 424 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 DUX4L4P0CJ87 422 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 DUX4L5P0CJ88 424 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 DUX4L6P0CJ89 424 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 DUX4L7P0CJ90 424 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 HIST1H1CP16403 213 aaKnown RBP17.62■□□□□ 0.41
PFDN4-205ENST00000493356 RFX4Q33E94 735 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 GLYATL3Q5SZD4 288 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 DUX4L9Q6RFH8 374 aaPredicted RBP17.62■□□□□ 0.41
PFDN4-205ENST00000493356 Q6ZPA2 131 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 OR4K13Q8NH42 304 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 SPTSSAQ969W0 71 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 SIRT7Q9NRC8 400 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 MRPL22Q9NWU5 206 aaKnown RBP17.62■□□□□ 0.41
PFDN4-205ENST00000493356 NDUFAF4Q9P032 175 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 DUX4Q9UBX2 424 aa17.62■□□□□ 0.41
PFDN4-205ENST00000493356 HLA-DQA2P01906 255 aa17.61■□□□□ 0.41
PFDN4-205ENST00000493356 PRB2P02812 416 aaPredicted RBP17.61■□□□□ 0.41
PFDN4-205ENST00000493356 OPN1MWP04001 364 aa17.61■□□□□ 0.41
PFDN4-205ENST00000493356 OPN1MW2P0DN77 364 aa17.61■□□□□ 0.41
PFDN4-205ENST00000493356 OPN1MW3P0DN78 364 aa17.61■□□□□ 0.41
PFDN4-205ENST00000493356 TROVE2P10155 538 aaKnown RBP eCLIP17.61■□□□□ 0.41
PFDN4-205ENST00000493356 ELF3P78545 371 aaPredicted RBP17.61■□□□□ 0.41
PFDN4-205ENST00000493356 PRB3Q04118 309 aaPredicted RBP17.61■□□□□ 0.41
PFDN4-205ENST00000493356 SAMD5Q5TGI4 173 aa17.61■□□□□ 0.41
PFDN4-205ENST00000493356 SLC35E4Q6ICL7 350 aa17.61■□□□□ 0.41
PFDN4-205ENST00000493356 GALNT4Q8N4A0 578 aa17.61■□□□□ 0.41
PFDN4-205ENST00000493356 FANK1Q8TC84 345 aa17.61■□□□□ 0.41
PFDN4-205ENST00000493356 FN3KQ9H479 309 aa17.61■□□□□ 0.41
PFDN4-205ENST00000493356 KRCC1Q9NPI7 259 aaPredicted RBP17.61■□□□□ 0.41
PFDN4-205ENST00000493356 FAM32AQ9Y421 112 aaKnown RBP17.61■□□□□ 0.41
PFDN4-205ENST00000493356 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.6■□□□□ 0.41
PFDN4-205ENST00000493356 OR6C68A6NDL8 312 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 RNASEK-C17orf49H0YIS7 233 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 NME4O00746 187 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 BHLHE40O14503 412 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 RHCEP18577 417 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 SLC6A6P31641 620 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 OTX1P32242 354 aaPredicted RBP17.6■□□□□ 0.41
PFDN4-205ENST00000493356 GUCA2AQ02747 115 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 SF3A3Q12874 501 aaKnown RBP eCLIP17.6■□□□□ 0.41
PFDN4-205ENST00000493356 PCK2Q16822 640 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 WDR38Q5JTN6 314 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 CMTM4Q8IZR5 234 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 LNX2Q8N448 690 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 OR56B2PQ8NGI1 322 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 DMRTB1Q96MA1 342 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 CCL13Q99616 98 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 FUZQ9BT04 418 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 OR52D1Q9H346 318 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 C14orf119Q9NWQ9 140 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 ADA2Q9NZK5 511 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 FBLN5Q9UBX5 448 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 KCNG2Q9UJ96 466 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 CAPN7Q9Y6W3 813 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 NOTCH3Q9UM47 2321 aa17.6■□□□□ 0.41
PFDN4-205ENST00000493356 ANKRD61A6NGH8 418 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 NPFFO15130 113 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 PIN1P1O15428 100 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 MUC1P15941 1255 aaPredicted RBP17.59■□□□□ 0.41
PFDN4-205ENST00000493356 EEF1B2P24534 225 aaKnown RBP17.59■□□□□ 0.41
PFDN4-205ENST00000493356 RPS27P42677 84 aaKnown RBP17.59■□□□□ 0.41
PFDN4-205ENST00000493356 GSK3BP49841 420 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 SLC7A2P52569 658 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 DLX1P56177 255 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 MZT1Q08AG7 82 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 HERPUD1Q15011 391 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 MICBQ29980 383 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 DRAM2Q6UX65 266 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 Q6ZTK2 550 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 C11orf53Q8IXP5 236 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 FAM216BQ8N7L0 139 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 Q8N7P7 452 aa17.59■□□□□ 0.41
PFDN4-205ENST00000493356 SDR9C7Q8NEX9 313 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms