RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 BCL6BQ8N143 479 aaPredicted RBP10.39□□□□□ -0.75
COL6A1-205ENST00000492851 FTMTQ8N4E7 242 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 FITM2Q8N6M3 262 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 CYB561A3Q8NBI2 242 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 OR9Q2Q8NGE9 314 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 OR52H1Q8NGJ2 320 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 NSL1Q96IY1 281 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 BTBD10Q9BSF8 475 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 NOX4Q9NPH5 578 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 UFSP2Q9NUQ7 469 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 SAMHD1Q9Y3Z3 626 aaKnown RBP10.39□□□□□ -0.75
COL6A1-205ENST00000492851 COMMD3-BMI1R4GMX3 469 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 TENM1Q9UKZ4 2725 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 A0A1B0GUS0 222 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 OOEPA6NGQ2 149 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 TIPRLO75663 272 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 IGHV4-38-2P0DP08 117 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 SPI1P17947 270 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 HSD11B1P28845 292 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 HNRNPA0Q13151 305 aaKnown RBP10.38□□□□□ -0.75
COL6A1-205ENST00000492851 CRMP1Q14194 572 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 SLC9A3R2Q15599 337 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 OR8B8Q15620 311 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 MPPED2Q15777 294 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 GLYATL3Q5SZD4 288 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 PRAMEF6Q5VXH4 476 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 OR2T5Q6IEZ7 315 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 LCN8Q6JVE9 175 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 C16orf87Q6PH81 154 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 CD300LDQ6UXZ3 194 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 SHFQ7M4L6 423 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 OR51L1Q8NGJ5 315 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 OR10S1Q8NGN2 331 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 OR6K6Q8NGW6 343 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 OR2T29Q8NH02 315 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 OR8S1Q8NH09 359 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 SPSB4Q96A44 273 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 FAM71F1Q96KD3 344 aaPredicted RBP10.38□□□□□ -0.75
COL6A1-205ENST00000492851 DMRTB1Q96MA1 342 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF48Q96MX3 618 aaPredicted RBP10.38□□□□□ -0.75
COL6A1-205ENST00000492851 TECTBQ96PL2 329 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 NMNAT2Q9BZQ4 307 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 MMADHCQ9H3L0 296 aaPredicted RBP10.38□□□□□ -0.75
COL6A1-205ENST00000492851 PRDM13Q9H4Q3 707 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF696Q9H7X3 374 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 PCDHGB1Q9Y5G3 927 aa10.38□□□□□ -0.75
COL6A1-205ENST00000492851 TRAV40A0A0B4J280 105 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF879B4DU55 563 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 GPR37O15354 613 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 GRPP07492 148 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 PAICSP22234 425 aaKnown RBP10.37□□□□□ -0.75
COL6A1-205ENST00000492851 CALB2P22676 271 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 RBMXP38159 391 aaKnown RBP10.37□□□□□ -0.75
COL6A1-205ENST00000492851 NAA10P41227 235 aaPredicted RBP10.37□□□□□ -0.75
COL6A1-205ENST00000492851 RPS27P42677 84 aaKnown RBP10.37□□□□□ -0.75
COL6A1-205ENST00000492851 PRKXP51817 358 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 FGF12P61328 243 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 PDCD1Q15116 288 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 TIGD6Q17RP2 521 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 PRR31Q5SQ13 230 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 FAM201AQ5SY85 155 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 SFRP4Q6FHJ7 346 aaPredicted RBP10.37□□□□□ -0.75
COL6A1-205ENST00000492851 LYPD2Q6UXB3 125 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 TMEM86BQ8N661 226 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF511Q8NB15 262 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 CSNK2A3Q8NEV1 391 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 OR9Q1Q8NGQ5 310 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 OR2AE1Q8NHA4 323 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 TEX47Q8TBZ9 253 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 ITFG2Q969R8 447 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 LRGUKQ96M69 825 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 SLITRK2Q9H156 845 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 RGCCQ9H4X1 137 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 RNPEPL1Q9HAU8 725 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 CMC2Q9NRP2 79 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 C1orf123Q9NWV4 160 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 PRPF19Q9UMS4 504 aaKnown RBP10.37□□□□□ -0.75
COL6A1-205ENST00000492851 N6AMT1Q9Y5N5 214 aa10.37□□□□□ -0.75
COL6A1-205ENST00000492851 TCRBV5S2A0A599 114 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 A6NLC8 198 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 SRRM5B3KS81 715 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 H3BN98 237 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 TNFRSF13BO14836 293 aaPredicted RBP10.36□□□□□ -0.75
COL6A1-205ENST00000492851 ADAM20O43506 726 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 TOX4O94842 621 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 LHBP01229 141 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 CRYBA1P05813 215 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 ANXA2P07355 339 aaKnown RBP10.36□□□□□ -0.75
COL6A1-205ENST00000492851 RAP2AP10114 183 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 MUC1P15941 1255 aaPredicted RBP10.36□□□□□ -0.75
COL6A1-205ENST00000492851 GSTT1P30711 240 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 PRSS12P56730 875 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 EIF2B1Q14232 305 aaKnown RBP10.36□□□□□ -0.75
COL6A1-205ENST00000492851 MICBQ29980 383 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 METTL11BQ5VVY1 283 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.36□□□□□ -0.75
COL6A1-205ENST00000492851 BOLLQ8N9W6 283 aaKnown RBP10.36□□□□□ -0.75
COL6A1-205ENST00000492851 OR8D4Q8NGM9 314 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 ZNRF4Q8WWF5 429 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms