RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ZNF829Q3KNS6 432 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 C5orf47Q569G3 176 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF684Q5T5D7 378 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 SAXO2Q658L1 398 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 NANOGP8Q6NSW7 305 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 RWDD4Q6NW29 188 aaKnown RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC16A13Q7RTY0 426 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 SNX20Q7Z614 316 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 WDFY1Q8IWB7 410 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR4K5Q8NGD3 323 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR52K1Q8NGK4 314 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR10G6Q8NH81 332 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 FRZBQ92765 325 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 FLYWCH2Q96CP2 140 aaKnown RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF488Q96MN9 340 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 HSD17B10Q99714 261 aaKnown RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 AGMATQ9BSE5 352 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 NAA50Q9GZZ1 169 aaKnown RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 FBXO44Q9H4M3 255 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 TMEM27Q9HBJ8 222 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 SIRT7Q9NRC8 400 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 CYTL1Q9NRR1 136 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 RGS18Q9NS28 235 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 DDX19BQ9UMR2 479 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF257Q9Y2Q1 563 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 UBIAD1Q9Y5Z9 338 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 ANKRD12Q6UB98 2062 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 COL27A1Q8IZC6 1860 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 IGLV4-60A0A075B6I1 120 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 SMIM26A0A096LP01 95 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 A0A1B0GUH1 482 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 A0A1W2PPV4 95 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 KRBOX1C9JBD0 128 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 H0YJW9 148 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 H3BN98 237 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 RBFOX2O43251 390 aaKnown RBP eCLIP1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 B4GALT5O43286 388 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 RAD1O60671 282 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 ADRA2AP08913 450 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR8U9P0C7N5 309 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR56A5P0C7T3 313 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 LINC00869P0C866 280 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 MUC1P15941 1255 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 TCP1P17987 556 aaKnown RBP1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 MYCNOSP40205 109 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 TAS2R46P59540 309 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR2B8PP59922 312 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 KRTAP10-10P60014 251 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 TFDP2Q14188 446 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 SNRNP35Q16560 246 aaKnown RBP1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 TPRG1LQ5T0D9 272 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 UBALD2Q8IYN6 164 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 H1FOOQ8IZA3 346 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 LGI3Q8N145 548 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 KIF2BQ8N4N8 673 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF709Q8N972 641 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 C19orf18Q8NEA5 215 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR5T3Q8NGG3 340 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR2L8Q8NGY9 312 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR52P1PQ8NH57 321 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 HAUS1Q96CS2 278 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 RBMXL1Q96E39 390 aaKnown RBP1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 SCGB3A2Q96PL1 93 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 TEAD3Q99594 435 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 FGF23Q9GZV9 251 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF442Q9H7R0 627 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC38A10Q9HBR0 1119 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 RRAGDQ9NQL2 400 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 DYRK4Q9NR20 520 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 WIF1Q9Y5W5 379 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 RFNGQ9Y644 331 aa1.6□□□□□ -2.15
HMGB1P30-201ENST00000492455 KIF27Q86VH2 1401 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 ARPC4-TTLL3A0A0A6YYG9 625 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 TRAV19A0A0A6YYK7 116 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 KDELR3O43731 214 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC19A2O60779 497 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 CTNSO60931 367 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 FOXH1O75593 365 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 CCNKO75909 580 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 VAMP5O95183 116 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 HLA-DQA1P01909 254 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF286BP0CG31 522 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 C1GALT1C1LP0DN25 315 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 MYL9P24844 172 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 HTR1DP28221 377 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 GGT2P36268 569 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 CXCL12P48061 93 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 AP1S2P56377 157 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 CARD18P57730 90 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 YWHAEP62258 255 aaKnown RBP1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 CRADDP78560 199 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 PPIDQ08752 370 aaKnown RBP1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 LY6EQ16553 131 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 MPV17L2Q567V2 206 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 MLIPQ5VWP3 458 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 FBXW9Q5XUX1 488 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR2T5Q6IEZ7 315 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 ASCL4Q6XD76 172 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 RTL4Q6ZR62 310 aa1.59□□□□□ -2.15
HMGB1P30-201ENST00000492455 CSGALNACT2Q8N6G5 542 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms