RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ZNF511Q8NB15 262 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 PROKR2Q8NFJ6 384 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 OR8B3Q8NGG8 313 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 OR11L1Q8NGX0 322 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 OR2T29Q8NH02 315 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 RNF133Q8WVZ7 376 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 DMRTB1Q96MA1 342 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 OR8B2Q96RD0 313 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 NUDT16L1Q9BRJ7 211 aaKnown RBP6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 FN3KRPQ9HA64 309 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 CMC2Q9NRP2 79 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 RNF7Q9UBF6 113 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 CTSZQ9UBR2 303 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 CLN8Q9UBY8 286 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 MMP24Q9Y5R2 645 aa6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 SOX21Q9Y651 276 aaPredicted RBP6.96□□□□□ -1.3
SMARCB1-207ENST00000491967 MEGF8Q7Z7M0 2845 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 DHRS12A0PJE2 317 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 TVP23AA6NH52 213 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 POM121CA8CG34 1229 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 B2RBV5 119 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 ACOT8O14734 319 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 SPRY1O43609 319 aaPredicted RBP6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 CLUP10909 449 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 SPI1P17947 270 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 GYS2P54840 703 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 FGF12P61328 243 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 HOXA4Q00056 320 aaPredicted RBP6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 BAMBIQ13145 260 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 OR8G1Q15617 311 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 KCNJ8Q15842 424 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 KLHL12Q53G59 568 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 FAM76BQ5HYJ3 339 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 PRAMEF6Q5VXH4 476 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 TEX36Q5VZQ5 186 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 CD276Q5ZPR3 534 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 SHISA2Q6UWI4 295 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 CYP2R1Q6VVX0 501 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 Q6YL49 198 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 DHFR2Q86XF0 187 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 GCSAMQ8N6F7 178 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 AQP11Q8NBQ7 271 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 OR2T33Q8NG76 320 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 OR51L1Q8NGJ5 315 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 OR2AE1Q8NHA4 323 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 SLC25A28Q96A46 364 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 SGK3Q96BR1 496 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 SLAMF6Q96DU3 332 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 NSL1Q96IY1 281 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 TSSK6Q9BXA6 273 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 MS4A7Q9GZW8 240 aaPredicted RBP6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 SLITRK2Q9H156 845 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 TLNRD1Q9H1K6 362 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 C1orf21Q9H246 121 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 TOR3AQ9H497 397 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 RNPEPL1Q9HAU8 725 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 NOX4Q9NPH5 578 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 TRIM36Q9NQ86 728 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 ZNF319Q9P2F9 582 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 TRRAPQ9Y4A5 3859 aa6.95□□□□□ -1.3
SMARCB1-207ENST00000491967 TRAV38-1A0A0B4J264 116 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 hCG_38984A0A1B0GV85 526 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 GGT3PA6NGU5 568 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 SRRM5B3KS81 715 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 ZNF879B4DU55 563 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 ZNF878C9JN71 531 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 P2RY10O00398 339 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 XRCC2O43543 280 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 GYPBP06028 91 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 IRF2P14316 349 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 OPRL1P41146 370 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 SLC15A1P46059 708 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 GRB2P62993 217 aaKnown RBP6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 GNGT1P63211 74 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 IL13RA1P78552 427 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 FAM3AP98173 230 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 MZT1Q08AG7 82 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 PPP1R8Q12972 351 aaKnown RBP6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 OR8B8Q15620 311 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 OCLNQ16625 522 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 ATPAF1Q5TC12 328 aaPredicted RBP6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 C16orf87Q6PH81 154 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 SLC16A9Q7RTY1 509 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 WDR86Q86TI4 376 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 FAM90A1Q86YD7 464 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 TIGD4Q8IY51 512 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 LY6G5BQ8NDX9 201 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 OR56B2PQ8NGI1 322 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 OR52H1Q8NGJ2 320 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 OR9Q1Q8NGQ5 310 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 ASB9Q96DX5 294 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 CCT8L2Q96SF2 557 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 TBX15Q96SF7 602 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 AMELYQ99218 206 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 FEVQ99581 238 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 NIPSNAP1Q9BPW8 284 aa6.94□□□□□ -1.3
SMARCB1-207ENST00000491967 COPS4Q9BT78 406 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms