RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 CFAP77Q6ZQR2 320 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 PLEKHG7Q6ZR37 379 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 SLC35F2Q8IXU6 374 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 LINC01356Q8N9X3 169 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 CLDND2Q8NHS1 167 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 SYNPRQ8TBG9 265 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 RNF133Q8WVZ7 376 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 MAP6Q96JE9 813 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 DDX28Q9NUL7 540 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 SLCO1C1Q9NYB5 712 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 DUSP13Q9UII6 198 aa9.39□□□□□ -0.91
TMEM39A-211ENST00000491685 CCDC182A6NF36 153 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 ACOD1A6NK06 481 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 M0R129 80 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 M0R135 149 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 RP2O75695 350 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 KRT8P05787 483 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 MRPL3P09001 348 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 SELEP16581 610 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 CFL1P23528 166 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 SRP14P37108 136 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 RPS27P42677 84 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 PRKXP51817 358 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 RIDAP52758 137 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 PPP1CBP62140 327 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 HNRNPA0Q13151 305 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 PCGF3Q3KNV8 242 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 KCTD21Q4G0X4 260 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 TMEM255AQ5JRV8 349 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 LYPD4Q6UWN0 246 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 ZNF679Q8IYX0 411 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 ACBD7Q8N6N7 88 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 OR10H4Q8NGA5 316 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 ABHD4Q8TB40 342 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 ST7LQ8TDW4 575 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 RDH5Q92781 318 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 ITFG2Q969R8 447 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 ZNF799Q96GE5 643 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 LPAR2Q9HBW0 351 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 ADGRL4Q9HBW9 690 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 INPP5EQ9NRR6 644 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 ZNF275Q9NSD4 429 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 MRPS18AQ9NVS2 196 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 CNOT2Q9NZN8 540 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 IKZF2Q9UKS7 526 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 EXOGQ9Y2C4 368 aaKnown RBP9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 N6AMT1Q9Y5N5 214 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 MEGF8Q7Z7M0 2845 aa9.38□□□□□ -0.91
TMEM39A-211ENST00000491685 B4DSR2 109 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 H3BSA7 217 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 ICMTO60725 284 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 SULT1C4O75897 302 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 CLIC3O95833 236 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 ANXA2P07355 339 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 RPSAP08865 295 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 ACSM4P0C7M7 580 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 DBTP11182 482 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 PIPP12273 146 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 GABRB1P18505 474 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 ACHEP22303 614 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 DCKP27707 260 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 GPR6P46095 362 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 HCCSP53701 268 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 DVL1P1P54792 670 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 TMEM33P57088 247 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 GABARAPL2P60520 117 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 ROM1Q03395 351 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 DBPQ10586 325 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 RNLSQ5VYX0 342 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 ZNF322Q6U7Q0 402 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 SPATC1Q76KD6 591 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 FAM220AQ7Z4H9 259 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 RFLNBQ8N5W9 214 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 OR52H1Q8NGJ2 320 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 HAVCR2Q8TDQ0 301 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 OR10A2Q9H208 303 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 AMBNQ9NP70 447 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 CYSLTR2Q9NS75 346 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 TREM2Q9NZC2 230 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 MYRFQ9Y2G1 1151 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 TPRKBQ9Y3C4 175 aa9.37□□□□□ -0.91
TMEM39A-211ENST00000491685 IGLV3-9A0A075B6K5 115 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 TMEM269A0A1B0GVZ9 245 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 A0A1W2PQL4 384 aaPredicted RBP9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 PLSCR5A0PG75 271 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 EFCAB10A6NFE3 127 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 METTL15A6NJ78 407 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 XRCC2O43543 280 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 NGFP01138 241 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 RAC2P15153 192 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 ZNF250P15622 560 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 MYL12AP19105 171 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 OPRL1P41146 370 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 KLF3P57682 345 aaPredicted RBP9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 ACTA2P62736 377 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 ACTG2P63267 376 aa9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 MRPL28Q13084 256 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 ZNF829Q3KNS6 432 aaPredicted RBP9.36□□□□□ -0.91
TMEM39A-211ENST00000491685 ZMAT1Q5H9K5 638 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms