RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 FCGR1AP12314 374 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 RPS2P15880 293 aaKnown RBP12.68□□□□□ -0.38
USP39-217ENST00000491659 ANOS1P23352 680 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 FASP25445 335 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 NAA10P41227 235 aaPredicted RBP12.68□□□□□ -0.38
USP39-217ENST00000491659 CRISP1P54107 249 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 MZT1Q08AG7 82 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 MAB21L1Q13394 359 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 SNAPC1Q16533 368 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 ESCO2Q56NI9 601 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 LCN1P1Q5VSP4 162 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 PRAMEF6Q5VXH4 476 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 TMEM236Q5W0B7 351 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.68□□□□□ -0.38
USP39-217ENST00000491659 PARP8Q8N3A8 854 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 OR56B2PQ8NGI1 322 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 OR52H1Q8NGJ2 320 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 OTOSQ8NHW6 89 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 TMPRSS13Q9BYE2 586 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 OCEL1Q9H607 264 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 KRT84Q9NSB2 600 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 TVP23BQ9NYZ1 205 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 DNAJC27Q9NZQ0 273 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 LRCH1Q9Y2L9 728 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 COL6A5A8TX70 2615 aa12.68□□□□□ -0.38
USP39-217ENST00000491659 PPIAL4EA0A075B759 164 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 LOC105371242A0A075B767 164 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 PPIAL4CA0A0B4J2A2 164 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 ANKRD30BLA7E2S9 258 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 A8MXK9 166 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
USP39-217ENST00000491659 PPIAL4DF5H284 164 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 G3V2T6 193 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 ZNF205O95201 554 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 PPIAL4FP0DN26 164 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 CFL1P23528 166 aaKnown RBP12.67□□□□□ -0.38
USP39-217ENST00000491659 CPT2P23786 658 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 DDOSTP39656 456 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 OPRL1P41146 370 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 DAPP51397 102 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 ZNF121P58317 390 aaPredicted RBP12.67□□□□□ -0.38
USP39-217ENST00000491659 ESRRGP62508 458 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 APOFQ13790 326 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 GFOD2Q3B7J2 385 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 KRTAP24-1Q3LI83 254 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 FAM57BQ71RH2 274 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 C1QL2Q7Z5L3 287 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 KLBQ86Z14 1044 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 SPERTQ8NA61 448 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 BBS1Q8NFJ9 593 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 Q8TCH9 128 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 THEM6Q8WUY1 208 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 DVL3Q92997 716 aaPredicted RBP12.67□□□□□ -0.38
USP39-217ENST00000491659 SPSB4Q96A44 273 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 REEP6Q96HR9 211 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 PGAM5Q96HS1 289 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 AMELYQ99218 206 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 OR10A2Q9H208 303 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 C7orf69Q9H7B7 122 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 FN3KRPQ9HA64 309 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 UFSP2Q9NUQ7 469 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 MIOXQ9UGB7 285 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 OR5V1Q9UGF6 321 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 ENOPH1Q9UHY7 261 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 PPIAL4AQ9Y536 164 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 AP4S1Q9Y587 144 aa12.67□□□□□ -0.38
USP39-217ENST00000491659 SVEP1Q4LDE5 3571 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 FAM20BO75063 409 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 FSTL3O95633 263 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 SLC2A5P22732 501 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 ZFP36P26651 326 aaKnown RBP12.66□□□□□ -0.38
USP39-217ENST00000491659 SEC61A1P61619 476 aaKnown RBP12.66□□□□□ -0.38
USP39-217ENST00000491659 SRSF2Q01130 221 aaKnown RBP12.66□□□□□ -0.38
USP39-217ENST00000491659 PTGES3Q15185 160 aaKnown RBP12.66□□□□□ -0.38
USP39-217ENST00000491659 NLRC3Q7RTR2 1065 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 SLC16A9Q7RTY1 509 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 ZDHHC13Q8IUH4 622 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 NANPQ8TBE9 248 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 BRD7Q9NPI1 651 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 C14orf119Q9NWQ9 140 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 LAMP5Q9UJQ1 280 aa12.66□□□□□ -0.38
USP39-217ENST00000491659 WNK2Q9Y3S1 2297 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 AVPP01185 164 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 ADRA2CP18825 462 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 EPHA1P21709 976 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 PMELP40967 661 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 PSMA6P60900 246 aaKnown RBP12.65□□□□□ -0.38
USP39-217ENST00000491659 FAM3AP98173 230 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 SNCBQ16143 134 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 ZNF404Q494X3 552 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 C1orf229Q6ZS94 237 aaPredicted RBP12.65□□□□□ -0.38
USP39-217ENST00000491659 CCDC121Q6ZUS5 278 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 PRSS45Q7RTY3 260 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 PLPP7Q8NBV4 271 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 OR8B3Q8NGG8 313 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 OR8S1Q8NH09 359 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 ZNF418Q8TF45 676 aaPredicted RBP12.65□□□□□ -0.38
USP39-217ENST00000491659 SGK3Q96BR1 496 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 NEIL1Q96FI4 390 aaPredicted RBP12.65□□□□□ -0.38
USP39-217ENST00000491659 DUS3LQ96G46 650 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms