RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839		A0A1W2PRQ8	180 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	GGT3P	A6NGU5	568 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	RNASEK-C17orf49	H0YIS7	233 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	NPFF	O15130	113 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	PAH	P00439	452 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	LHB	P01229	141 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	FXYD6P3	P58550	94 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	ZNF92	Q03936	586 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	DGCR6	Q14129	220 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	SLC35E4	Q6ICL7	350 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	TSEN54	Q7Z6J9	526 aa	Known RBP	12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	OR6V1	Q8N148	313 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	SPTSSA	Q969W0	71 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	HSH2D	Q96JZ2	352 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	PPA2	Q9H2U2	334 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	SRA1	Q9HD15	236 aa	Known RBP	12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	C14orf119	Q9NWQ9	140 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	AP3M1	Q9Y2T2	418 aa		12.52	□□□□□ -0.41
AGAP3-222	ENST00000490839	IGHV3OR15-7	A0A075B7D8	119 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	UNC119B	A6NIH7	251 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	EDF1	O60869	148 aa	Known RBP	12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	REN	P00797	406 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	H1F0	P07305	194 aa	Known RBP	12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	GRP	P07492	148 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	MUC1	P15941	1255 aa	Predicted RBP	12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	OMP	P47874	163 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	EFNB2	P52799	333 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	MICB	Q29980	383 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	RFX4	Q33E94	735 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	SNAI3	Q3KNW1	292 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	FGD3	Q5JSP0	725 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	SMARCD3	Q6STE5	483 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	FKBP9P1	Q75LS8	142 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	CBLL1	Q75N03	491 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	FGFRL1	Q8N441	504 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	OR2AE1	Q8NHA4	323 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	MRAP	Q8TCY5	172 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	ERMAP	Q96PL5	475 aa	Predicted RBP	12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	KCNG2	Q9UJ96	466 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	ENPP4	Q9Y6X5	453 aa		12.51	□□□□□ -0.41
AGAP3-222	ENST00000490839	CXCR6	O00574	342 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	BHLHE40	O14503	412 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	TROVE2	P10155	538 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	POU4F2	Q12837	409 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	KLF10	Q13118	480 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	PCK2	Q16822	640 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	WDR38	Q5JTN6	314 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	SLC36A1	Q7Z2H8	476 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	ARPIN	Q7Z6K5	226 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	ZBTB46	Q86UZ6	589 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	OR4C13	Q8NGP0	309 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	CFHR4	Q92496	578 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	NMNAT3	Q96T66	252 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	CCL13	Q99616	98 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	OPA3	Q9H6K4	179 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	RNPEPL1	Q9HAU8	725 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	RPRD1B	Q9NQG5	326 aa	Known RBP	12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839	DNAH3	Q8TD57	4116 aa		12.5	□□□□□ -0.41
AGAP3-222	ENST00000490839		A0A1B0GW55	424 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	ARPC3	O15145	178 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	HLA-DQA2	P01906	255 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DUX4L2	P0CJ85	424 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DUX4L3	P0CJ86	424 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DUX4L4	P0CJ87	422 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DUX4L5	P0CJ88	424 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DUX4L6	P0CJ89	424 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DUX4L7	P0CJ90	424 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	OTX1	P32242	354 aa	Predicted RBP	12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	GRK5	P34947	590 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	SAA4	P35542	130 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	LOXL3	P58215	753 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DBP	Q10586	325 aa	Predicted RBP	12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	KLRD1	Q13241	179 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	GLYATL3	Q5SZD4	288 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DUX4L9	Q6RFH8	374 aa	Predicted RBP	12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DRAM2	Q6UX65	266 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	FAM216B	Q8N7L0	139 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839		Q8N7P7	452 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	OR56B2P	Q8NGI1	322 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	C8orf46	Q8TAG6	207 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	FANK1	Q8TC84	345 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	LRRC29	Q8WV35	223 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	C12orf43	Q96C57	262 aa	Known RBP	12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	MAP6	Q96JE9	813 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	CMTM6	Q9NX76	183 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	GMPR2	Q9P2T1	348 aa	Known RBP	12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	DUX4	Q9UBX2	424 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	PRPF19	Q9UMS4	504 aa	Known RBP	12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	SIGLEC9	Q9Y336	463 aa		12.49	□□□□□ -0.41
AGAP3-222	ENST00000490839	LOC100653049	A0A140TA62	436 aa		12.48	□□□□□ -0.41
AGAP3-222	ENST00000490839		A0A1W2PRD5	423 aa		12.48	□□□□□ -0.41
AGAP3-222	ENST00000490839		A0A1W2PRF3	423 aa		12.48	□□□□□ -0.41
AGAP3-222	ENST00000490839		A0A1W2PRM7	423 aa		12.48	□□□□□ -0.41
AGAP3-222	ENST00000490839	MEIOC	A2RUB1	952 aa		12.48	□□□□□ -0.41
AGAP3-222	ENST00000490839	GSTA4	O15217	222 aa		12.48	□□□□□ -0.41
AGAP3-222	ENST00000490839	NDUFB3	O43676	98 aa		12.48	□□□□□ -0.41
AGAP3-222	ENST00000490839	XPNPEP2	O43895	674 aa		12.48	□□□□□ -0.41
AGAP3-222	ENST00000490839	KRT34	O76011	436 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms