RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 RAC2P15153 192 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 ZNF3P17036 446 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 POLR2IP36954 125 aaKnown RBP8.75□□□□□ -1.01
TTC28-207ENST00000490475 ESRRGP62508 458 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 FOXL1Q12952 345 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 PSG7Q13046 419 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 SNAPC1Q16533 368 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 ARMCX4Q5H9R4 360 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 LINC01590Q5TEZ4 76 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 CFAP77Q6ZQR2 320 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 SATL1Q86VE3 508 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 PARP8Q8N3A8 854 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 ZNF283Q8N7M2 679 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 BBS1Q8NFJ9 593 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 TSPAN14Q8NG11 270 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 OR6K6Q8NGW6 343 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 OR2AJ1Q8NGZ0 328 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 ZNF420Q8TAQ5 688 aaPredicted RBP8.75□□□□□ -1.01
TTC28-207ENST00000490475 HAVCR1Q96D42 359 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 PLEKHA8Q96JA3 519 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 PITX2Q99697 317 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 CIB1Q99828 191 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 GABARAPL1Q9H0R8 117 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 POFUT1Q9H488 388 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 PATZ1Q9HBE1 687 aaKnown RBP8.75□□□□□ -1.01
TTC28-207ENST00000490475 SLC25A19Q9HC21 320 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 PURGQ9UJV8 347 aaKnown RBP8.75□□□□□ -1.01
TTC28-207ENST00000490475 PPP1R3CQ9UQK1 317 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 STARD10Q9Y365 291 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 ANK2Q01484 3957 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 A0A087WXM4 84 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 A8MXK9 166 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 M0R129 80 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 FSTL3O95633 263 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 IGHV2-70P01814 119 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 SBK2P0C263 348 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 PPIAL4GP0DN37 164 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 SELEP16581 610 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 PAICSP22234 425 aaKnown RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 MDH2P40926 338 aaKnown RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 SRP9P49458 86 aaKnown RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 BTG1P62324 171 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 LCN2P80188 198 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 DCTN2Q13561 401 aaKnown RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 KLHL12Q53G59 568 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 ESCO2Q56NI9 601 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 TMEM255AQ5JRV8 349 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 C1orf229Q6ZS94 237 aaPredicted RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 BCDIN3DQ7Z5W3 292 aaKnown RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 NAA40Q86UY6 237 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 LRRC28Q86X40 367 aaPredicted RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 C1orf87Q8N0U7 546 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 OR2Z1Q8NG97 314 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 OR10S1Q8NGN2 331 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 OR13G1Q8NGZ3 307 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 APOBEC3DQ96AK3 386 aaPredicted RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 MAP6Q96JE9 813 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 C9orf16Q9BUW7 83 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 OSBPL10Q9BXB5 764 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 TEX12Q9BXU0 123 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 HDHD2Q9H0R4 259 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 MSL2Q9HCI7 577 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 PNRC2Q9NPJ4 139 aaKnown RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 OR5V1Q9UGF6 321 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 RSL24D1Q9UHA3 163 aaKnown RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 NUP50Q9UKX7 468 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 NOP16Q9Y3C1 178 aaKnown RBP8.74□□□□□ -1.01
TTC28-207ENST00000490475 AUP1Q9Y679 476 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 CACNG2Q9Y698 323 aa8.74□□□□□ -1.01
TTC28-207ENST00000490475 LRRC30A6NM36 301 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 ZAR1LA6NP61 321 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 F5H5K5 113 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 SPRY1O43609 319 aaPredicted RBP8.73□□□□□ -1.01
TTC28-207ENST00000490475 PRKYO43930 277 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 GLCEO94923 617 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 AVPP01185 164 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 SPARCP09486 303 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 ENTPD1P49961 510 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 EFNB1P98172 346 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 ECH1Q13011 328 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 PCK2Q16822 640 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 TEX30Q5JUR7 227 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 SLX4IPQ5VYV7 408 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 BTNL3Q6UXE8 466 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 FBXW12Q6X9E4 464 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 SPATC1Q76KD6 591 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 DCXRQ7Z4W1 244 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 GTF3AQ92664 365 aaKnown RBP8.73□□□□□ -1.01
TTC28-207ENST00000490475 TFAP2CQ92754 450 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 ERGIC1Q969X5 290 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 CMBLQ96DG6 245 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 CNBD2Q96M20 576 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 ZNF582Q96NG8 517 aaPredicted RBP8.73□□□□□ -1.01
TTC28-207ENST00000490475 RDH12Q96NR8 316 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 COQ7Q99807 217 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 RBM4BQ9BQ04 359 aaKnown RBP8.73□□□□□ -1.01
TTC28-207ENST00000490475 RIBC2Q9H4K1 309 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 KCNG2Q9UJ96 466 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 TENM1Q9UKZ4 2725 aa8.73□□□□□ -1.01
TTC28-207ENST00000490475 H0YAE9 185 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms