RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 BEST3Q8N1M1 668 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 ZNF561Q8N587 486 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 RFLNBQ8N5W9 214 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 METTL27Q8N6F8 245 aaPredicted RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 TSTD1Q8NFU3 115 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 OR5AR1Q8NGP9 310 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 OR13C2Q8NGS9 318 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 LYPD6BQ8NI32 183 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 DUSP19Q8WTR2 217 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 MITD1Q8WV92 249 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 TMEM239Q8WW34 195 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 PIGKQ92643 395 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 GTF3AQ92664 365 aaKnown RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 CDS1Q92903 461 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 MCHR2Q969V1 340 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 PTX4Q96A99 478 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 OTUB2Q96DC9 234 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 BPIFA2Q96DR5 249 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 CNRIP1Q96F85 164 aaPredicted RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 DTD2Q96FN9 168 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 C16orf58Q96GQ5 468 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 ZNF514Q96K75 400 aaPredicted RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 ART5Q96L15 291 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 ZNF681Q96N22 645 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 YPEL4Q96NS1 127 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 OR5B2Q96R09 309 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 F2RL3Q96RI0 385 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 GPX7Q96SL4 187 aaPredicted RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 TBX5Q99593 518 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 VRK1Q99986 396 aaPredicted RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 PAPOLGQ9BWT3 736 aaKnown RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 SLC17A9Q9BYT1 436 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 DPH1Q9BZG8 443 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 TINAGL1Q9GZM7 467 aaPredicted RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 ZNF350Q9GZX5 532 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 AICDAQ9GZX7 198 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 TWSG1Q9GZX9 223 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 OR52A5Q9H2C5 316 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 OPA3Q9H6K4 179 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 MTHFD2LQ9H903 347 aaPredicted RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 NIT2Q9NQR4 276 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 POLE3Q9NRF9 147 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 SDHAF3Q9NRP4 125 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 CYTL1Q9NRR1 136 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 CUTCQ9NTM9 273 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 C20orf141Q9NUB4 165 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 DCAF16Q9NXF7 216 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 PPP1R14DQ9NXH3 145 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 GDE1Q9NZC3 331 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 RNF7Q9UBF6 113 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 DHCR7Q9UBM7 475 aaKnown RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 TRPC4Q9UBN4 977 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 GHRLQ9UBU3 117 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 MIOXQ9UGB7 285 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 CHRNA9Q9UGM1 479 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 STEAP1Q9UHE8 339 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 FBXL4Q9UKA2 621 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 CES1P1Q9UKY3 287 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 MMP17Q9ULZ9 603 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 SLC7A7Q9UM01 511 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 CLEC4AQ9UMR7 237 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 AK6Q9Y3D8 172 aaKnown RBP3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 SLC22A7Q9Y694 548 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 KCNE3Q9Y6H6 103 aa3.06□□□□□ -1.92
CRNKL1-203ENST00000490258 GON4LQ3T8J9 2241 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 TBC1D3DA0A087WVF3 549 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 TBC1D3IA0A087WXS9 549 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 TBC1D3KA0A087X1G2 549 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 A0A0B4J2A0 478 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 A0A0B4J2E0 115 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 TRBV2A0A0J9YWF9 115 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 A0A1B0GVT2 93 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 A0A1B0GX12 115 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 A0A1W2PPV9 198 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 GXYLT2A0PJZ3 443 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 LRIT2A6NDA9 550 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 TBC1D3FA6NER0 549 aaPredicted RBP3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 OR2W5A6NFC9 320 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 TVP23AA6NH52 213 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 ARGFXA6NJG6 315 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 TMEM212A6NML5 194 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 OR4C45A6NMZ5 311 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 TBC1D3LB9A6J9 549 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 RPL36A-HNRNPH2H7BZ11 118 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 SLC17A2O00624 439 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 PPM1DO15297 605 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 HCRTR1O43613 425 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 PLRG1O43660 514 aaKnown RBP3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 OR2T1O43869 369 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 FADS1O60427 444 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 CDC40O60508 579 aaKnown RBP eCLIP3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 FCMRO60667 390 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 SRPX2O60687 465 aaPredicted RBP3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 LDB3O75112 727 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 CTAG2O75638 210 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 SEMA4FO95754 770 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 AIFM1O95831 613 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 IFNA10P01566 189 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 IGLV2-14P01704 120 aa3.05□□□□□ -1.92
CRNKL1-203ENST00000490258 CRHP06850 196 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms