RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 MED11Q9P086 117 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 UXTQ9UBK9 157 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 MGAT4AQ9UM21 535 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 IGHV4-30-2A0A087WSY4 118 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 hDV102S1A0JD36 115 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PRSS37A4D1T9 235 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 VSTM2BA6NLU5 285 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 E9PAM4 449 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 MRASO14807 208 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 TCAPO15273 167 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ORC5O43913 435 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 STX11O75558 287 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ALPLP05186 524 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 KLK3P07288 261 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 FBP1P09467 338 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ZSCAN5DPP0CG00 497 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 NR2C1P13056 603 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF35P13682 527 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 TAS2R60P59551 318 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 RAB5BP61020 215 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PLA2G7Q13093 441 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ORC2Q13416 577 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 PRPSAP1Q14558 356 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 KYAT1Q16773 422 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 RNF212Q495C1 297 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 C2CD6Q53TS8 623 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 TIMM23BQ5SRD1 257 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 N4BP2L1Q5TBK1 243 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 FAM199XQ6PEV8 388 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SPESP1Q6UW49 350 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 C9orf47Q6ZRZ4 202 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SPRED1Q7Z699 444 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 MRGPRGQ86SM5 289 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 APOBEC3FQ8IUX4 373 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CDKL3Q8IVW4 592 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CMTM8Q8IZV2 173 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 LIX1Q8N485 282 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ATPAF2Q8N5M1 289 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 OR4A4PQ8NGN8 299 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 LGALS14Q8TCE9 139 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CPNE4Q96A23 557 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CCDC126Q96EE4 140 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 KRTAP9-3Q9BYQ3 159 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 SLC25A19Q9HC21 320 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 MRPL47Q9HD33 250 aaKnown RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 CCNB1IP1Q9NPC3 277 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ABCC13Q9NSE7 274 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 C14orf105Q9NVL8 296 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF282Q9UDV7 671 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 KCNG2Q9UJ96 466 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 ING1Q9UK53 422 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 WIF1Q9Y5W5 379 aa2.36□□□□□ -2.03
UBXN4-208ENST00000490163 TP53BP1Q12888 1972 aaPredicted RBP2.36□□□□□ -2.03
UBXN4-208ENST00000490163 A0A087X002 238 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 RPS10-NUDT3A0A1W2PQS6 291 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 TCRBV9S1A1TA0A576 114 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 SNURFLB1AK76 121 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 M0R233 179 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 INPP4BO15327 924 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 RAB3DO95716 219 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 ACTL6AO96019 429 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 SLC2A2P11168 524 aaPredicted RBP2.35□□□□□ -2.03
UBXN4-208ENST00000490163 HLA-EP13747 358 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 IGFBP3P17936 291 aaPredicted RBP2.35□□□□□ -2.03
UBXN4-208ENST00000490163 OXTRP30559 389 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 GPR183P32249 361 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 SHMT2P34897 504 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 ELK3P41970 407 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 KIR2DS4P43632 304 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 BDKRB1P46663 353 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 VLDLRP98155 873 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 IL5RAQ01344 420 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 FASTKQ14296 549 aaKnown RBP2.35□□□□□ -2.03
UBXN4-208ENST00000490163 PTGR1Q14914 329 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 CYP51A1Q16850 503 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 LCN1P1Q5VSP4 162 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 MFSD14CQ5VZR4 134 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 TRIQKQ629K1 86 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 ELP2Q6IA86 826 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 FAM53AQ6NSI3 398 aaPredicted RBP2.35□□□□□ -2.03
UBXN4-208ENST00000490163 ACSM5Q6NUN0 579 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 SCYL2Q6P3W7 929 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 EPGNQ6UW88 154 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 TMEM207Q6UWW9 146 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 RTL4Q6ZR62 310 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 P4HA3Q7Z4N8 544 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 RNF130Q86XS8 419 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 C9orf62Q8N4C0 152 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 C4orf32Q8N8J7 132 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 SMRP1Q8NCR6 262 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 DTD1Q8TEA8 209 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 ALX4Q9H161 411 aaPredicted RBP2.35□□□□□ -2.03
UBXN4-208ENST00000490163 MED28Q9H204 178 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 OR51J1Q9H342 316 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 WDR54Q9H977 334 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 AGPAT4Q9NRZ5 378 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 NAGKQ9UJ70 344 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 POMT2Q9UKY4 750 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 OARD1Q9Y530 152 aa2.35□□□□□ -2.03
UBXN4-208ENST00000490163 ALG5Q9Y673 324 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms