RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 DERL2Q9GZP9 239 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 WDR13Q9H1Z4 485 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CLMPQ9H6B4 373 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 METTL17Q9H7H0 456 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 GIN1Q9NXP7 522 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 THYN1Q9P016 225 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 COPS3Q9UNS2 423 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PPP1R3CQ9UQK1 317 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PYGO1Q9Y3Y4 419 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 HYOU1Q9Y4L1 999 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CCDC171Q6TFL3 1326 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 LAMA3Q16787 3333 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 TRGV8A0A0C4DH27 118 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 TMEM213A2RRL7 107 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 GOLGA6L10A6NI86 522 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 OR6C70A6NIJ9 312 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 LOC110117498-PIK3R3F6TDL0 507 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 SMKR1H3BMG3 65 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 CDC7O00311 574 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 PDHXO00330 501 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 UGT1A9O60656 530 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 UGT2B17O75795 530 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 TIMP1P01033 207 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 IGHG1P01857 330 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 FGF1P05230 155 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 OCMP0CE72 109 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 GIMD1P0DJR0 217 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 TCP1P17987 556 aaKnown RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 G0S2P27469 103 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 GNRHRP30968 328 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 TSFMP43897 325 aaKnown RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 RND2P52198 227 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 NUP107P57740 925 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF121P58317 390 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 SNAP25P60880 206 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 RPL10AP62906 217 aaKnown RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 CHRNB3Q05901 458 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 MGAT3Q09327 533 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 GPNMBQ14956 572 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 SF3A2Q15428 464 aaKnown RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 OR4D1Q15615 310 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 SLC1A5Q15758 541 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 FAM53AQ6NSI3 398 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 BLIDQ8IZY5 108 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 CYP4Z2PQ8N1L4 340 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 C6orf223Q8N319 242 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 DUSP18Q8NEJ0 188 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 OR5T2Q8NGG2 359 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 OR8K1Q8NGG5 319 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 OR5D18Q8NGL1 313 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 OR2AE1Q8NHA4 323 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 MRAPQ8TCY5 172 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 CHCHD10Q8WYQ3 142 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 ARPC1AQ92747 370 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 DGCR14Q96DF8 476 aaKnown RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 PAGE5Q96GU1 130 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 SCGB3A2Q96PL1 93 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 NICN1Q9BSH3 213 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 TRIM51Q9BSJ1 452 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 DGCR6LQ9BY27 220 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 HES7Q9BYE0 225 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 ARMC7Q9H6L4 198 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 SP140LQ9H930 580 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 TMBIM4Q9HC24 238 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 PLEKHJ1Q9NW61 149 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 MCUBQ9NWR8 336 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 TMEM181Q9P2C4 612 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 SPRR3Q9UBC9 169 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF282Q9UDV7 671 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 TMCO1Q9UM00 188 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 ST3GAL6Q9Y274 331 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 SNX24Q9Y343 169 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 AUP1Q9Y679 476 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 KIAA0100Q14667 2235 aaKnown RBP2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 DOCK1Q14185 1865 aa2.49□□□□□ -2.01
DEPDC1-204ENST00000489862 PLXNB2O15031 1838 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ATAD5Q96QE3 1844 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 SPTBN5Q9NRC6 3674 aaKnown RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 NAV1Q8NEY1 1877 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 LOC285556D6RIA3 1793 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 TRABD2BA6NFA1 517 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ANKRD63C9JTQ0 380 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 E7ESA3 106 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 FGF16O43320 207 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 MPZL2O60487 215 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 DPM1O60762 260 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 GJB5O95377 273 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 DEXIO95424 95 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 NUDT14O95848 222 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 RHOCP08134 193 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 RPS17P08708 135 aaKnown RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 RPSAP08865 295 aaKnown RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 PET100P0DJ07 73 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 RAB4AP20338 218 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ATP6V1B2P21281 511 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 SHC1P29353 583 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 SHMT2P34897 504 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ELK3P41970 407 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 DNASE1L1P49184 302 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms