RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 ISPDA4D126 451 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 GMDSO60547 372 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 MSMBP08118 114 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 MRPL3P09001 348 aaKnown RBP16.11■□□□□ 0.17
EPHB4-207ENST00000489808 FAM157CP0CG43 387 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 PMELP40967 661 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 MMP16P51512 607 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 FAM3AP98173 230 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 TIGD6Q17RP2 521 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 DEGS2Q6QHC5 323 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 LRRN1Q6UXK5 716 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 KRT77Q7Z794 578 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 MOGAT3Q86VF5 341 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 GLCCI1Q86VQ1 547 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 OR56B2PQ8NGI1 322 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 ZNF420Q8TAQ5 688 aaPredicted RBP16.11■□□□□ 0.17
EPHB4-207ENST00000489808 TMEM186Q96B77 213 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 REEP6Q96HR9 211 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 PGAM5Q96HS1 289 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 RAB3IPQ96QF0 476 aaPredicted RBP16.11■□□□□ 0.17
EPHB4-207ENST00000489808 GAL3ST1Q99999 423 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 RIBC2Q9H4K1 309 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 NIPAL2Q9H841 368 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 BRD7Q9NPI1 651 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 HIF1ANQ9NWT6 349 aa16.11■□□□□ 0.17
EPHB4-207ENST00000489808 NOP16Q9Y3C1 178 aaKnown RBP16.11■□□□□ 0.17
EPHB4-207ENST00000489808 SLC22A31A6NKX4 558 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 KIAA1324LA8MWY0 1029 aaPredicted RBP16.1■□□□□ 0.17
EPHB4-207ENST00000489808 ALPLP05186 524 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 CD200P41217 278 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 GATA4P43694 442 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 RAD23AP54725 363 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 BTG1P62324 171 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 OR8G1Q15617 311 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 ZNF181Q2M3W8 571 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 KCTD18Q6PI47 426 aaPredicted RBP16.1■□□□□ 0.17
EPHB4-207ENST00000489808 OR51F2Q8NH61 342 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 ERGIC1Q969X5 290 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 S100A14Q9HCY8 104 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 HAO2Q9NYQ3 351 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 UBAP1Q9NZ09 502 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 USE1Q9NZ43 259 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 TMEM14AQ9Y6G1 99 aa16.1■□□□□ 0.17
EPHB4-207ENST00000489808 TRAV20A0A0B4J274 112 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 PLPP2O43688 288 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 PCMT1P22061 227 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 CFL1P23528 166 aaKnown RBP16.09■□□□□ 0.17
EPHB4-207ENST00000489808 ROM1Q03395 351 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 ZMYND11Q15326 602 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 TMEM155Q4W5P6 130 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 KLBQ86Z14 1044 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 GID4Q8IVV7 300 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 SPERTQ8NA61 448 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 ASB17Q8WXJ9 295 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 CNN2Q99439 309 aaKnown RBP16.09■□□□□ 0.17
EPHB4-207ENST00000489808 MROQ9BYG7 248 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 RGCCQ9H4X1 137 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 COPS3Q9UNS2 423 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 LRP12Q9Y561 859 aa16.09■□□□□ 0.17
EPHB4-207ENST00000489808 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.08■□□□□ 0.172e-7■■■□□ 17.9
EPHB4-207ENST00000489808 LRRC30A6NM36 301 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 PSMD9O00233 223 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 EI24O14681 340 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 ZNF254O75437 659 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 CYB5R3P00387 301 aaPredicted RBP16.08■□□□□ 0.16
EPHB4-207ENST00000489808 IFNA2P01563 188 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 HNF1AP20823 631 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 GSK3AP49840 483 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 IL17RELQ6ZVW7 336 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 ZNF771Q7L3S4 317 aaPredicted RBP16.08■□□□□ 0.16
EPHB4-207ENST00000489808 ZNF679Q8IYX0 411 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 SPICQ8N5J4 248 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 PLPP7Q8NBV4 271 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 OR8J1Q8NGP2 316 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 MNTQ99583 582 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 ADGRL4Q9HBW9 690 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 TMEM165Q9HC07 324 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 PCDHB10Q9UN67 800 aa16.08■□□□□ 0.16
EPHB4-207ENST00000489808 hCG_38984A0A1B0GV85 526 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 ACOD1A6NK06 481 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 ANKRD30BLA7E2S9 258 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 PRR32B1ATL7 298 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 PTBP3O95758 552 aaKnown RBP16.07■□□□□ 0.16
EPHB4-207ENST00000489808 DCTDP32321 178 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 MDH2P40926 338 aaKnown RBP16.07■□□□□ 0.16
EPHB4-207ENST00000489808 ALDH3A2P51648 485 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 PSMA6P60900 246 aaKnown RBP16.07■□□□□ 0.16
EPHB4-207ENST00000489808 MPPED2Q15777 294 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 PRAMEF6Q5VXH4 476 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 KLHL36Q8N4N3 616 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 CBR4Q8N4T8 237 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 Q8TCH9 128 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 TRUB1Q8WWH5 349 aaKnown RBP16.07■□□□□ 0.16
EPHB4-207ENST00000489808 OR8B4Q96RC9 309 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 ADAT1Q9BUB4 502 aaKnown RBP16.07■□□□□ 0.16
EPHB4-207ENST00000489808 PATZ1Q9HBE1 687 aaKnown RBP16.07■□□□□ 0.16
EPHB4-207ENST00000489808 WARS2Q9UGM6 360 aaKnown RBP16.07■□□□□ 0.16
EPHB4-207ENST00000489808 ORC6Q9Y5N6 252 aa16.07■□□□□ 0.16
EPHB4-207ENST00000489808 TMEM269A0A1B0GVZ9 245 aa16.06■□□□□ 0.16
EPHB4-207ENST00000489808 E9PQ18 207 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms