RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	SGK3	Q96BR1	496 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	REEP6	Q96HR9	211 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	PGAM5	Q96HS1	289 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	CNN2	Q99439	309 aa	Known RBP	9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	GABARAPL3	Q9BY60	117 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	MRO	Q9BYG7	248 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	RIBC2	Q9H4K1	309 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	RGCC	Q9H4X1	137 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	NIPAL2	Q9H841	368 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	LPAR2	Q9HBW0	351 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	TMEFF2	Q9UIK5	374 aa	Predicted RBP	9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	ORC6	Q9Y5N6	252 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	TMEM14A	Q9Y6G1	99 aa		9.36	□□□□□ -0.91
GGA1-222	ENST00000489772	C5orf63	A6NC05	138 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	CCDC182	A6NF36	153 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	ANKRD30BL	A7E2S9	258 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772		H3BNX3	289 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	TMEM178B	H3BS89	294 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	GMDS	O60547	372 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	IGHV2-70	P01814	119 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	IGHV2-5	P01817	119 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	MRPL3	P09001	348 aa	Known RBP	9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	SBK2	P0C263	348 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	IRF2	P14316	349 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	SRD5A1	P18405	259 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	ANOS1	P23352	680 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	POLR2I	P36954	125 aa	Known RBP	9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	DDOST	P39656	456 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	CD200	P41217	278 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	GATA4	P43694	442 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	HCCS	P53701	268 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	BTG1	P62324	171 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	EFNB1	P98172	346 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	MZT1	Q08AG7	82 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	CR1L	Q2VPA4	569 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	GFOD2	Q3B7J2	385 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	AADACL4	Q5VUY2	407 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	DEGS2	Q6QHC5	323 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	LRRN1	Q6UXK5	716 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	PRSS45	Q7RTY3	260 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	KRT77	Q7Z794	578 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	MOGAT3	Q86VF5	341 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	KLB	Q86Z14	1044 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	GID4	Q8IVV7	300 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	KLHL36	Q8N4N3	616 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	SPERT	Q8NA61	448 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	ASB17	Q8WXJ9	295 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	ERGIC1	Q969X5	290 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	IL4I1	Q96RQ9	567 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	ADAT1	Q9BUB4	502 aa	Known RBP	9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	BRD7	Q9NPI1	651 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	HIF1AN	Q9NWT6	349 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	DCAF16	Q9NXF7	216 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	UBAP1	Q9NZ09	502 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	PCDHB10	Q9UN67	800 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	KLHDC2	Q9Y2U9	406 aa		9.35	□□□□□ -0.91
GGA1-222	ENST00000489772	TRAV20	A0A0B4J274	112 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	IGHV3-64D	A0A0J9YX35	117 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772		M0R129	80 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	MDH2	P40926	338 aa	Known RBP	9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	PSMA6	P60900	246 aa	Known RBP	9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	FAM3A	P98173	230 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	HNRNPA0	Q13151	305 aa	Known RBP	9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	MAB21L1	Q13394	359 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	ZMYND11	Q15326	602 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	SNCB	Q16143	134 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	ZNF181	Q2M3W8	571 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	TMEM155	Q4W5P6	130 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	ZNF771	Q7L3S4	317 aa	Predicted RBP	9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	BCDIN3D	Q7Z5W3	292 aa	Known RBP	9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	LRRC28	Q86X40	367 aa	Predicted RBP	9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	C1orf87	Q8N0U7	546 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	MUC20	Q8N307	709 aa	Predicted RBP	9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	FTMT	Q8N4E7	242 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	PLPP7	Q8NBV4	271 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	OR56B2P	Q8NGI1	322 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	OR11L1	Q8NGX0	322 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	ZNF420	Q8TAQ5	688 aa	Predicted RBP	9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	SIGLEC11	Q96RL6	698 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	MNT	Q99583	582 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	ZNF391	Q9UJN7	358 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	LRP12	Q9Y561	859 aa		9.34	□□□□□ -0.91
GGA1-222	ENST00000489772	hCG_38984	A0A1B0GV85	526 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	EI24	O14681	340 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	PHYH	O14832	338 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	PLPP2	O43688	288 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	ZNF254	O75437	659 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	CYB5R3	P00387	301 aa	Predicted RBP	9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	ALPL	P05186	524 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	RBMX	P38159	391 aa	Known RBP	9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	GSK3A	P49840	483 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	ALDH3A2	P51648	485 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	CDC42	P60953	191 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	ROM1	Q03395	351 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	FAHD2B	Q6P2I3	314 aa	Predicted RBP	9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	IL17REL	Q6ZVW7	336 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	ZNF679	Q8IYX0	411 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	CBR4	Q8N4T8	237 aa		9.33	□□□□□ -0.92
GGA1-222	ENST00000489772	CSNK2A3	Q8NEV1	391 aa		9.33	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms