RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ARPINQ7Z6K5 226 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 LNX2Q8N448 690 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 ZNF799Q96GE5 643 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 FN3KQ9H479 309 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 ONECUT1Q9UBC0 465 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 DNAJB11Q9UBS4 358 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 RPUSD1Q9UJJ7 312 aaKnown RBP13.97□□□□□ -0.17
TOP3B-217ENST00000489581 AP3M1Q9Y2T2 418 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 A0A1B0GW55 424 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 A0A1W2PRD5 423 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 A0A1W2PRF3 423 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 A0A1W2PRM7 423 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 BTBD17A6NE02 478 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 G3V4G9 280 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 NME4O00746 187 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 DIRAS1O95057 198 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 DUX4L2P0CJ85 424 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 DUX4L3P0CJ86 424 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 DUX4L4P0CJ87 422 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 DUX4L5P0CJ88 424 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 DUX4L6P0CJ89 424 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 DUX4L7P0CJ90 424 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 NCK1P16333 377 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 RPS27P42677 84 aaKnown RBP13.96□□□□□ -0.17
TOP3B-217ENST00000489581 RFX4Q33E94 735 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 FBLN7Q53RD9 439 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 GLYATL3Q5SZD4 288 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 DUX4L9Q6RFH8 374 aaPredicted RBP13.96□□□□□ -0.17
TOP3B-217ENST00000489581 OR52J3Q8NH60 311 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 FAM162AQ96A26 154 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 MAP6Q96JE9 813 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 NSRP1Q9H0G5 558 aaKnown RBP13.96□□□□□ -0.17
TOP3B-217ENST00000489581 ADA2Q9NZK5 511 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 NDUFAF4Q9P032 175 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 KAAG1Q9UBP8 84 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 DUX4Q9UBX2 424 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 ZNF281Q9Y2X9 895 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 KPTNQ9Y664 436 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 CAPN7Q9Y6W3 813 aa13.96□□□□□ -0.17
TOP3B-217ENST00000489581 A0A1B0GVI7 797 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 TSPAN9O75954 239 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 LHBP01229 141 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 PRB2P02812 416 aaPredicted RBP13.95□□□□□ -0.18
TOP3B-217ENST00000489581 FBP1P09467 338 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 RHCEP18577 417 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 SLC7A2P52569 658 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 DLX1P56177 255 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 ZBTB46Q86UZ6 589 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 SDR9C7Q8NEX9 313 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 FANK1Q8TC84 345 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 SPTSSAQ969W0 71 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 CCL13Q99616 98 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 IFT27Q9BW83 186 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 OR52D1Q9H346 318 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 KRCC1Q9NPI7 259 aaPredicted RBP13.95□□□□□ -0.18
TOP3B-217ENST00000489581 SIRT7Q9NRC8 400 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 MRPL22Q9NWU5 206 aaKnown RBP13.95□□□□□ -0.18
TOP3B-217ENST00000489581 MRPL15Q9P015 296 aaKnown RBP13.95□□□□□ -0.18
TOP3B-217ENST00000489581 ZNRD1Q9P1U0 126 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 VPREB3Q9UKI3 123 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 CAB39Q9Y376 341 aaPredicted RBP13.95□□□□□ -0.18
TOP3B-217ENST00000489581 N6AMT1Q9Y5N5 214 aa13.95□□□□□ -0.18
TOP3B-217ENST00000489581 OR6C68A6NDL8 312 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 BHLHE40O14503 412 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 ARPC3O15145 178 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 NOS3P29474 1203 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 SLC6A6P31641 620 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 GSK3BP49841 420 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 BEAN1Q3B7T3 259 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 C11orf91Q3C1V1 193 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 TEX36Q5VZQ5 186 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 CGB2Q6NT52 195 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 SPERTQ8NA61 448 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 LY6G5BQ8NDX9 201 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 OR56B2PQ8NGI1 322 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 FGFR1OP2Q9NVK5 253 aa13.94□□□□□ -0.18
TOP3B-217ENST00000489581 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.93□□□□□ -0.18
TOP3B-217ENST00000489581 ZNF823P16415 610 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 TGFBR2P37173 567 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 KLRD1Q13241 179 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 PCK2Q16822 640 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 MICBQ29980 383 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 WDR38Q5JTN6 314 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 SLC35F1Q5T1Q4 408 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 SLC35E4Q6ICL7 350 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 NPRL2Q8WTW4 380 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 LRRC29Q8WV35 223 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 SEH1LQ96EE3 360 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 C7orf34Q96L11 122 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 FUZQ9BT04 418 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 C14orf119Q9NWQ9 140 aa13.93□□□□□ -0.18
TOP3B-217ENST00000489581 ANKRD61A6NGH8 418 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 TVP23AA6NH52 213 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 RNASEK-C17orf49H0YIS7 233 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 NPFFO15130 113 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 SLC2A1P11166 492 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 EEF1B2P24534 225 aaKnown RBP13.92□□□□□ -0.18
TOP3B-217ENST00000489581 PYCR1P32322 319 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 PRKXP51817 358 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 MZT1Q08AG7 82 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms