RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 LRRN1Q6UXK5 716 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 BCDIN3DQ7Z5W3 292 aaKnown RBP11.31□□□□□ -0.6
CCL28-202ENST00000489442 GLCCI1Q86VQ1 547 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 GID4Q8IVV7 300 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 STMN2Q93045 179 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 REEP6Q96HR9 211 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 CNN2Q99439 309 aaKnown RBP11.31□□□□□ -0.6
CCL28-202ENST00000489442 MROQ9BYG7 248 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 NIPAL2Q9H841 368 aa11.31□□□□□ -0.6
CCL28-202ENST00000489442 ARHGAP32A7KAX9 2087 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 SVEP1Q4LDE5 3571 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.3□□□□□ -0.6
CCL28-202ENST00000489442 C5orf63A6NC05 138 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 CCDC182A6NF36 153 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 ANKRD30BLA7E2S9 258 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 FAM157AC9JC47 383 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 EI24O14681 340 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 GMDSO60547 372 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 MSMBP08118 114 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 IRF2P14316 349 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 ALOX5APP20292 161 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 DDOSTP39656 456 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 CDC42P60953 191 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 AADACL4Q5VUY2 407 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 MOGAT3Q86VF5 341 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 C1orf87Q8N0U7 546 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 KLHL36Q8N4N3 616 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 OR56B2PQ8NGI1 322 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 OR51F2Q8NH61 342 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 ZNF420Q8TAQ5 688 aaPredicted RBP11.3□□□□□ -0.6
CCL28-202ENST00000489442 ASB17Q8WXJ9 295 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 SGK3Q96BR1 496 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 ADAT1Q9BUB4 502 aaKnown RBP11.3□□□□□ -0.6
CCL28-202ENST00000489442 GABARAPL3Q9BY60 117 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 S100A14Q9HCY8 104 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 IMPAD1Q9NX62 359 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 DCAF16Q9NXF7 216 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 MRPL15Q9P015 296 aaKnown RBP11.3□□□□□ -0.6
CCL28-202ENST00000489442 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
CCL28-202ENST00000489442 IKZF2Q9UKS7 526 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 KLHDC2Q9Y2U9 406 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 LRP12Q9Y561 859 aa11.3□□□□□ -0.6
CCL28-202ENST00000489442 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 PSMD9O00233 223 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 BAG2O95816 211 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 IFNA2P01563 188 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 IGHV2-5P01817 119 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 ALPLP05186 524 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 ANOS1P23352 680 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 ATP6V1E1P36543 226 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 MMP16P51512 607 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 ALDH3A2P51648 485 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 DVL1P1P54792 670 aaPredicted RBP11.29□□□□□ -0.6
CCL28-202ENST00000489442 BTG1P62324 171 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 EFNB1P98172 346 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 MZT1Q08AG7 82 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 HNRNPA0Q13151 305 aaKnown RBP11.29□□□□□ -0.6
CCL28-202ENST00000489442 CR1LQ2VPA4 569 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 ZIK1Q3SY52 487 aaPredicted RBP11.29□□□□□ -0.6
CCL28-202ENST00000489442 DEGS2Q6QHC5 323 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 CBR4Q8N4T8 237 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 SPICQ8N5J4 248 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 CELF2-AS1Q8N7Q2 184 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 SPERTQ8NA61 448 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 OR8J1Q8NGP2 316 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 OR11L1Q8NGX0 322 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 OR8S1Q8NH09 359 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 SPSB4Q96A44 273 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 TMEM186Q96B77 213 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 C1orf159Q96HA4 380 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 C9orf16Q9BUW7 83 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 TTTY10Q9BZA0 68 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 RGCCQ9H4X1 137 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 UFSP2Q9NUQ7 469 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 HIF1ANQ9NWT6 349 aa11.29□□□□□ -0.6
CCL28-202ENST00000489442 TMEM269A0A1B0GVZ9 245 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 ZNF670-ZNF695F2Z2N8 137 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 PHYHO14832 338 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 ZNF254O75437 659 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 IGHV2-70P01814 119 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 FAM157CP0CG43 387 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 SRD5A1P18405 259 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 RBMXP38159 391 aaKnown RBP11.28□□□□□ -0.6
CCL28-202ENST00000489442 GNALP38405 381 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 RIDAP52758 137 aaKnown RBP11.28□□□□□ -0.6
CCL28-202ENST00000489442 PSMA6P60900 246 aaKnown RBP11.28□□□□□ -0.6
CCL28-202ENST00000489442 CXCR4P61073 352 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 FAM3AP98173 230 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 MAB21L1Q13394 359 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 SNCBQ16143 134 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 KRTAP21-3Q3LHN1 58 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 IL17RELQ6ZVW7 336 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 COMMD2Q86X83 199 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 KLBQ86Z14 1044 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 SLC35F2Q8IXU6 374 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 ZNF679Q8IYX0 411 aa11.28□□□□□ -0.6
CCL28-202ENST00000489442 MUC20Q8N307 709 aaPredicted RBP11.28□□□□□ -0.6
CCL28-202ENST00000489442 FTMTQ8N4E7 242 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms