RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 IGHV1-69DA0A0B4J2H0 117 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 GGT3PA6NGU5 568 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 TVP23AA6NH52 213 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 NDUFA2O43678 99 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 IDH3BO43837 385 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 IGHV1-69P01742 117 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 ZNF823P16415 610 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 RRM2P31350 389 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 PYCR1P32322 319 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 RPL15P61313 204 aaKnown RBP10.25□□□□□ -0.77
CPSF3-204ENST00000489403 PDCD1Q15116 288 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 ZNF826PQ6ZT77 177 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 RHOUQ7L0Q8 258 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 FAM90A1Q86YD7 464 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 PNLDC1Q8NA58 520 aaKnown RBP10.25□□□□□ -0.77
CPSF3-204ENST00000489403 CYB561A3Q8NBI2 242 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 GNPDA2Q8TDQ7 276 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 LHX4Q969G2 390 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 DDOQ99489 341 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 NSRP1Q9H0G5 558 aaKnown RBP10.25□□□□□ -0.77
CPSF3-204ENST00000489403 EGLN3Q9H6Z9 239 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 ADA2Q9NZK5 511 aa10.25□□□□□ -0.77
CPSF3-204ENST00000489403 MRPL15Q9P015 296 aaKnown RBP10.25□□□□□ -0.77
CPSF3-204ENST00000489403 A0A0U1RQK1 487 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 A6NLC8 198 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 BHLHE40O14503 412 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 GMNNO75496 209 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 IGHV4-59P01825 116 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 GRPP07492 148 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 SLC2A1P11166 492 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 ARF6P62330 175 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 TSPAN31Q12999 210 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 TEX36Q5VZQ5 186 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 PGBD2Q6P3X8 592 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 DRAM2Q6UX65 266 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 BTN2A1Q7KYR7 527 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 DCXRQ7Z4W1 244 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 LDLRAD3Q86YD5 345 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 FGFRL1Q8N441 504 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 LNX2Q8N448 690 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 PROKR2Q8NFJ6 384 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 OR56B2PQ8NGI1 322 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 TBC1D15Q8TC07 691 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 DYRK2Q92630 601 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 CMTM5Q96DZ9 223 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 CCT8L2Q96SF2 557 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 COPS4Q9BT78 406 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 TRIM15Q9C019 465 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 MYLK2Q9H1R3 596 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 MMP27Q9H306 513 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 RNF114Q9Y508 228 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 COMMD3-BMI1R4GMX3 469 aa10.24□□□□□ -0.77
CPSF3-204ENST00000489403 IGHV3OR15-7A0A075B7D8 119 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 A0A1B0GW55 424 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 hCG_1807616A0A1W2PRN6 198 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 M0QZ24 198 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 DVL1O14640 695 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 TIMM23O14925 209 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 GPR137BO60478 399 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 LHBP01229 141 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 FABP3P05413 133 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 DUX4L2P0CJ85 424 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 DUX4L3P0CJ86 424 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 DUX4L4P0CJ87 422 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 DUX4L5P0CJ88 424 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 DUX4L6P0CJ89 424 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 DUX4L7P0CJ90 424 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 IFNGR2P38484 337 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 IER3P46695 156 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 PRKXP51817 358 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 ELF3P78545 371 aaPredicted RBP10.23□□□□□ -0.77
CPSF3-204ENST00000489403 POU4F2Q12837 409 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 ASPHD2Q6ICH7 369 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 DUX4L9Q6RFH8 374 aaPredicted RBP10.23□□□□□ -0.77
CPSF3-204ENST00000489403 WDR86Q86TI4 376 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 ZDHHC21Q8IVQ6 265 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 PDZD9Q8IXQ8 264 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 SPERTQ8NA61 448 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 SLC37A3Q8NCC5 494 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 OR9Q2Q8NGE9 314 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 OR52L1Q8NGH7 329 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 OR51L1Q8NGJ5 315 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 OR2T4Q8NH00 348 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 LINC01006Q8NI28 216 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 ST8SIA4Q92187 359 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 OPA3Q9H6K4 179 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 ZNF446Q9NWS9 450 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 KAAG1Q9UBP8 84 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 DUX4Q9UBX2 424 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 MAGEL2Q9UJ55 1249 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 CDH10Q9Y6N8 788 aa10.23□□□□□ -0.77
CPSF3-204ENST00000489403 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.22□□□□□ -0.77
CPSF3-204ENST00000489403 XRCC2O43543 280 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 CLPXO76031 633 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 SPARCP09486 303 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 PRDX6P30041 224 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 MSX2P35548 267 aaPredicted RBP10.22□□□□□ -0.77
CPSF3-204ENST00000489403 PROK1P58294 105 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 MZT1Q08AG7 82 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 PCK2Q16822 640 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms