RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TCP10LQ8TDR4 215 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 RAX2Q96IS3 184 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 MCHR1Q99705 422 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 TXNIPQ9H3M7 391 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 RNPEPL1Q9HAU8 725 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 ZDHHC18Q9NUE0 388 aa9.14□□□□□ -0.95
HDAC6-233ENST00000489352 TBL2Q9Y4P3 447 aaKnown RBP9.14□□□□□ -0.95
HDAC6-233ENST00000489352 PRORSD1PA6NEY8 169 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 FAM90A8PA6NJQ4 464 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 SELLP14151 372 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 FUT1P19526 365 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 DYNLT3P51808 116 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 CAV3P56539 151 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 NME5P56597 212 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 GMFBP60983 142 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 RPP25LQ8N5L8 163 aaKnown RBP9.13□□□□□ -0.95
HDAC6-233ENST00000489352 OR8S1Q8NH09 359 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 OR8U1Q8NH10 309 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 BCAS4Q8TDM0 211 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 STMN2Q93045 179 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 MAL2Q969L2 176 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 DNTTIP1Q9H147 329 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 RAD21L1Q9H4I0 556 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 EVA1AQ9H8M9 152 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 TPT1P8Q9HAU6 139 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 ATPIF1Q9UII2 106 aa9.13□□□□□ -0.95
HDAC6-233ENST00000489352 SIRT4Q9Y6E7 314 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-233ENST00000489352 KMT2AQ03164 3969 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 A0A1W2PPM1 405 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 GGT3PA6NGU5 568 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 CPSF4LA6NMK7 179 aaKnown RBP9.12□□□□□ -0.95
HDAC6-233ENST00000489352 COPEO14579 308 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 TPST1O60507 370 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 SCG5P05408 212 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 GCAP28676 217 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 MVDP53602 400 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 RPL27P61353 136 aaKnown RBP9.12□□□□□ -0.95
HDAC6-233ENST00000489352 GNG11P61952 73 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 DYNC1I2Q13409 638 aaKnown RBP9.12□□□□□ -0.95
HDAC6-233ENST00000489352 PCLAFQ15004 111 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 SEC23BQ15437 767 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 ATPAF1Q5TC12 328 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-233ENST00000489352 DPY19L4Q7Z388 723 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 SEH1LQ96EE3 360 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 ZBTB18Q99592 522 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 ATF6BQ99941 703 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 AKTIPQ9H8T0 292 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 SNTG1Q9NSN8 517 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 HAO2Q9NYQ3 351 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 PSMC3IPQ9P2W1 217 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-233ENST00000489352 SLC7A7Q9UM01 511 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 POLR1DQ9Y2S0 133 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 HILPDAQ9Y5L2 63 aa9.12□□□□□ -0.95
HDAC6-233ENST00000489352 NPIPB13A6NJU9 1138 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 CD300LBA8K4G0 201 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 NPIPB4C9JG80 1138 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 TPST2O60704 377 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 LCATP04180 440 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 PGA5P0DJD9 388 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 OR3A4PP47883 348 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 CAPZA1P52907 286 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 SLC35B1P78383 322 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 LAPTM4AQ15012 233 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 DGUOKQ16854 277 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 CCDC92Q53HC0 331 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-233ENST00000489352 C16orf89Q6UX73 402 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 LCNL1Q6ZST4 164 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 ZNF572Q7Z3I7 529 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-233ENST00000489352 LNX2Q8N448 690 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 OR4Q3Q8NH05 313 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 OR5K1Q8NHB7 308 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 MOSPD2Q8NHP6 518 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 CHPT1Q8WUD6 406 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 MPP4Q96JB8 637 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 ZIM3Q96PE6 472 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 LIN7BQ9HAP6 207 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 ELL3Q9HB65 397 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-233ENST00000489352 PLA2G2EQ9NZK7 142 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 DNAH10Q8IVF4 4471 aa9.11□□□□□ -0.95
HDAC6-233ENST00000489352 A6NIZ1 184 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 BHLHE40O14503 412 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 RER1O15258 196 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 SERPINB7O75635 380 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 OR7A10O76100 309 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 NUDT7P0C024 238 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 GABRA2P47869 451 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 SLC25A1P53007 311 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 WDR4P57081 412 aaKnown RBP9.1□□□□□ -0.95
HDAC6-233ENST00000489352 CTXN1P60606 82 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 RAP1BP61224 184 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 RAP1AP62834 184 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 SRSF7Q16629 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
HDAC6-233ENST00000489352 ALG10Q5BKT4 473 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 ENTPD8Q5MY95 495 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 STUMQ69YW2 141 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 ZNF782Q6ZMW2 699 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-233ENST00000489352 TMEM185AQ8NFB2 350 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 OR13D1Q8NGV5 346 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 NFKBIDQ8NI38 313 aa9.1□□□□□ -0.95
HDAC6-233ENST00000489352 LRRC8CQ8TDW0 803 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms