RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 RRAGDQ9NQL2 400 aaPredicted RBP2.8□□□□□ -1.96
XRN1-213ENST00000489241 CTSFQ9UBX1 484 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 OR51B2Q9Y5P1 312 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 WSB1Q9Y6I7 421 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 V9GYY9 64 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 A0A096LNJ9 63 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 SMIM26A0A096LP01 95 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 IGHV1-69DA0A0B4J2H0 117 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 K7ERQ8 282 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 DNASE2O00115 360 aaPredicted RBP2.79□□□□□ -1.96
XRN1-213ENST00000489241 DFFAO00273 331 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 ANGPTL7O43827 346 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 PTTG1O95997 202 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 GCGP01275 180 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 PSG2P11465 335 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 IGFBP3P17936 291 aaPredicted RBP2.79□□□□□ -1.96
XRN1-213ENST00000489241 MYL9P24844 172 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 GGT2P36268 569 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 UCNP55089 124 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 TNNC1P63316 161 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 IRF4Q15306 451 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 NDUFAF6Q330K2 333 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 TFDP3Q5H9I0 405 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 APOBEC3HQ6NTF7 200 aaKnown RBP2.79□□□□□ -1.96
XRN1-213ENST00000489241 CD300LGQ6UXG3 332 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 NDUFAF7Q7L592 441 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 KRTAP11-1Q8IUC1 163 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 RBM45Q8IUH3 476 aaKnown RBP2.79□□□□□ -1.96
XRN1-213ENST00000489241 TCAIMQ8N3R3 496 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 GLT1D1Q96MS3 346 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 TIMM17AQ99595 171 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 GABRG3Q99928 467 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 SAMD10Q9BYL1 202 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 ZNF442Q9H7R0 627 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 TMEM27Q9HBJ8 222 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 ZNF229Q9UJW7 825 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 SCN2AQ99250 2005 aa2.79□□□□□ -1.96
XRN1-213ENST00000489241 PIK3R4Q99570 1358 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 A0A0A6YYD5 115 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 RAB19A4D1S5 217 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 TMX2-CTNND1H3BSU7 103 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 PRMT5O14744 637 aaPredicted RBP2.78□□□□□ -1.96
XRN1-213ENST00000489241 MDKP21741 143 aaPredicted RBP2.78□□□□□ -1.96
XRN1-213ENST00000489241 BGNP21810 368 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 ZNF133P52736 654 aaPredicted RBP2.78□□□□□ -1.96
XRN1-213ENST00000489241 HCCSP53701 268 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 TAS2R46P59540 309 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 RPL31P62899 125 aaKnown RBP2.78□□□□□ -1.96
XRN1-213ENST00000489241 SIGLEC14Q08ET2 396 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 GPR176Q14439 515 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 TCEAL5Q5H9L2 206 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 CPTPQ5TA50 214 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 DUPD1Q68J44 220 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 DEGS2Q6QHC5 323 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 NKAIN4Q8IVV8 208 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 CDKL3Q8IVW4 592 aaPredicted RBP2.78□□□□□ -1.96
XRN1-213ENST00000489241 OR51A7Q8NH64 312 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 TCEAL3Q969E4 200 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 FAM19A4Q96LR4 140 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 UTP23Q9BRU9 249 aaKnown RBP2.78□□□□□ -1.96
XRN1-213ENST00000489241 SYT4Q9H2B2 425 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 TPK1Q9H3S4 243 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 C12orf10Q9HB07 376 aa2.78□□□□□ -1.96
XRN1-213ENST00000489241 TSSC4Q9Y5U2 329 aaPredicted RBP2.78□□□□□ -1.96
XRN1-213ENST00000489241 ADAMTS13Q76LX8 1427 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 IGLV1-50A0A075B6I6 118 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.77□□□□□ -1.97
XRN1-213ENST00000489241 IGHV5-10-1A0A0J9YXX1 117 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 TVP23AA6NH52 213 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 LINC01619G3V211 115 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 K7EN84 100 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 RAD1O60671 282 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 SC5DO75845 299 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 SLC25A14O95258 325 aaPredicted RBP2.77□□□□□ -1.97
XRN1-213ENST00000489241 RHOCP08134 193 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 IGHV1-8P0DP01 117 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 ZNF823P16415 610 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 HTR1DP28221 377 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 GNRHRP30968 328 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 DEKP35659 375 aaKnown RBP2.77□□□□□ -1.97
XRN1-213ENST00000489241 ARL2P36404 184 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 POLR2IP36954 125 aaKnown RBP2.77□□□□□ -1.97
XRN1-213ENST00000489241 CD151P48509 253 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 TAS2R60P59551 318 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 RPL23P62829 140 aaKnown RBP2.77□□□□□ -1.97
XRN1-213ENST00000489241 RAP1AP62834 184 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 DMTNQ08495 405 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 IFFO1Q0D2I5 559 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 RBMY1FQ15415 496 aaKnown RBP2.77□□□□□ -1.97
XRN1-213ENST00000489241 TAL2Q16559 108 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 ZNF658BQ4V348 819 aaPredicted RBP2.77□□□□□ -1.97
XRN1-213ENST00000489241 FBXW9Q5XUX1 488 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 Q6ZVH6 145 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 SLC30A8Q8IWU4 369 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 OR4D6Q8NGJ1 314 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 OR6N2Q8NGY6 317 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 C15orf40Q8WUR7 153 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 TMEM234Q8WY98 164 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 PTX4Q96A99 478 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms