RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SLC35E1Q96K37 410 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 LGALS4P56470 323 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 PMP22Q01453 160 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 C9orf152Q5JTZ5 239 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 BTNL8Q6UX41 500 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 OR10P1Q8NGE3 313 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 ROBO4Q8WZ75 1007 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 FRG2CA6NGY1 282 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 RTN4IP1Q8WWV3 396 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-209ENST00000489180 AKR1E2Q96JD6 320 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 C12orf57Q99622 126 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 PLEKHA2Q9HB19 425 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 ABCD4O14678 606 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 FKBP2P26885 142 aaKnown RBP15.89■□□□□ 0.13
NPHP4-209ENST00000489180 PINX1Q96BK5 328 aaKnown RBP15.89■□□□□ 0.13
NPHP4-209ENST00000489180 LINC00615Q96LM1 132 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-209ENST00000489180 IL21Q9HBE4 155 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 H3BP45 60 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 ATF1P18846 271 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 CRYBB2P43320 205 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 ASCL1P50553 236 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 SHHQ15465 462 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 GLDNQ6ZMI3 551 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-209ENST00000489180 TRILQ7L0X0 811 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 OR51I2Q9H344 312 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 C20orf141Q9NUB4 165 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 LRP12Q9Y561 859 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 hCG_1809904A0A1W2PP81 198 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 A0A1W2PPE2 198 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 A0A1W2PR64 198 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 A0A1W2PRV1 198 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 K7EQM0 130 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 CLDN15P56746 228 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 INSM1Q01101 510 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-209ENST00000489180 GALNT16Q8N428 558 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 TRIB1Q96RU8 372 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 EVPLQ92817 2033 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 WNT3P56703 355 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 DMWDQ09019 674 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 AMER3Q8N944 861 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 SOX7Q9BT81 388 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 TEX101Q9BY14 249 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 ACTR3CQ9C0K3 210 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-209ENST00000489180 FER1L6Q2WGJ9 1857 aa15.89■□□□□ 0.13
NPHP4-209ENST00000489180 ANGPTL7O43827 346 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 SLC25A6P12236 298 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 SMIM7Q9BQ49 75 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 SLC35D1Q9NTN3 355 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 FOXJ3Q9UPW0 622 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 CDC20BQ86Y33 519 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 TMEM229BQ8NBD8 167 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 AKR7LQ8NHP1 331 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 SLC39A7Q92504 469 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 CABLES2Q9BTV7 478 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 NMES1Q9C002 83 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 POLDIP2Q9Y2S7 368 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 ZGLP1P0C6A0 271 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 SELEP16581 610 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 PDCD1Q15116 288 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 TMEM240Q5SV17 173 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 RFPL4AA6NLU0 287 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 RFPL4AL1F8VTS6 287 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 YKT6O15498 198 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 LRRTM1Q86UE6 522 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 OR5B3Q8NH48 314 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 CYSLTR2Q9NS75 346 aa15.88■□□□□ 0.13
NPHP4-209ENST00000489180 SLC31A2O15432 143 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 OR5G3P0C626 314 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 RAC1P63000 192 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 ST3GAL2Q16842 350 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 ZADH2Q8N4Q0 377 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 KDF1Q8NAX2 398 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-209ENST00000489180 UBAC2Q8NBM4 344 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 RHOFQ9HBH0 211 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 SLX4Q8IY92 1834 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 SERTM2A0A1B0GWG4 89 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 PNLIPRP2P54317 469 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 SSX1Q16384 188 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 ZDHHC23Q8IYP9 409 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 PLAC1Q9HBJ0 212 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 HSPB2A8KAH6 182 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 PPIAP62937 165 aaKnown RBP15.87■□□□□ 0.13
NPHP4-209ENST00000489180 ZNF816Q0VGE8 651 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-209ENST00000489180 HSPB2Q16082 182 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 TCTN1Q2MV58 587 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 CDK5Q00535 292 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 CD300CQ08708 224 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 ELFN2Q5R3F8 820 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 ZNF793Q6ZN11 406 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 NT5CQ8TCD5 201 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 CMBLQ96DG6 245 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 LIN7CQ9NUP9 197 aaKnown RBP15.87■□□□□ 0.13
NPHP4-209ENST00000489180 SFTA3P0C7M3 94 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 ARR3P36575 388 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 ALKBH6Q3KRA9 238 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 TMEM196Q5HYL7 178 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 C11orf87Q6NUJ2 197 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 SLC16A12Q6ZSM3 486 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 ZNF573Q86YE8 665 aa15.87■□□□□ 0.13
NPHP4-209ENST00000489180 OSR2Q8N2R0 312 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms