RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CPOQ8IVL8 374 aa11.73□□□□□ -0.53
VTI1A-206ENST00000489142 TIGD4Q8IY51 512 aa11.73□□□□□ -0.53
VTI1A-206ENST00000489142 ZNF418Q8TF45 676 aaPredicted RBP11.73□□□□□ -0.53
VTI1A-206ENST00000489142 SSBP3Q9BWW4 388 aaPredicted RBP11.73□□□□□ -0.53
VTI1A-206ENST00000489142 PPP1R3EQ9H7J1 279 aa11.73□□□□□ -0.53
VTI1A-206ENST00000489142 ZNF556Q9HAH1 456 aa11.73□□□□□ -0.53
VTI1A-206ENST00000489142 NTN4Q9HB63 628 aa11.73□□□□□ -0.53
VTI1A-206ENST00000489142 DNAJB9Q9UBS3 223 aa11.73□□□□□ -0.53
VTI1A-206ENST00000489142 KLHDC2Q9Y2U9 406 aa11.73□□□□□ -0.53
VTI1A-206ENST00000489142 PPIAL4AQ9Y536 164 aa11.73□□□□□ -0.53
VTI1A-206ENST00000489142 IGHV3OR16-10A0A075B7F0 116 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 A8MXK9 166 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 IFNL4K9M1U5 179 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 FSHBP01225 129 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 GRPP07492 148 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 IRF2P14316 349 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 ZNF12P17014 697 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 CD80P33681 288 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 GATA4P43694 442 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 BLVRAP53004 296 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 SCGB2A2Q13296 93 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 TIGD6Q17RP2 521 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 ZNF181Q2M3W8 571 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 ZNF404Q494X3 552 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 ARMCX4Q5H9R4 360 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 ZNF826PQ6ZT77 177 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 BPIFB2Q8N4F0 458 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 OR11L1Q8NGX0 322 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 RNF133Q8WVZ7 376 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 REEP6Q96HR9 211 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 MARCH7Q9H992 704 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 KIF17Q9P2E2 1029 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 ZNF319Q9P2F9 582 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 OR5V1Q9UGF6 321 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 LRCH1Q9Y2L9 728 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 INSIG2Q9Y5U4 225 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 AUP1Q9Y679 476 aa11.72□□□□□ -0.53
VTI1A-206ENST00000489142 A6NLC8 198 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 C3orf80F5H4A9 247 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 M0R129 80 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 GSC2O15499 205 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 XRCC2O43543 280 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 H2BFMP0C1H6 154 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 OPRL1P41146 370 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 SLC15A1P46059 708 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 HCCSP53701 268 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 RPS7P62081 194 aaKnown RBP11.71□□□□□ -0.53
VTI1A-206ENST00000489142 GNB2P62879 340 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 FAM3AP98173 230 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 CDK5Q00535 292 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 KLF17Q5JT82 389 aaPredicted RBP11.71□□□□□ -0.53
VTI1A-206ENST00000489142 SLC16A9Q7RTY1 509 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 PRSS45Q7RTY3 260 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 C1orf87Q8N0U7 546 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 TEX29Q8N6K0 151 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 CELF2-AS1Q8N7Q2 184 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 PAPD5Q8NDF8 572 aaKnown RBP11.71□□□□□ -0.53
VTI1A-206ENST00000489142 OR8B3Q8NGG8 313 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 Q8TCH9 128 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 THEM6Q8WUY1 208 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 SGK3Q96BR1 496 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 NEIL1Q96FI4 390 aaPredicted RBP11.71□□□□□ -0.53
VTI1A-206ENST00000489142 PLEKHA8Q96JA3 519 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 OR8B2Q96RD0 313 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 MRI1Q9BV20 369 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 MMADHCQ9H3L0 296 aaPredicted RBP11.71□□□□□ -0.53
VTI1A-206ENST00000489142 YY1AP1Q9H869 796 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 FN3KRPQ9HA64 309 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 ESM1Q9NQ30 184 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 C1orf123Q9NWV4 160 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 TVP23BQ9NYZ1 205 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 MRPL15Q9P015 296 aaKnown RBP11.71□□□□□ -0.53
VTI1A-206ENST00000489142 MIOXQ9UGB7 285 aa11.71□□□□□ -0.53
VTI1A-206ENST00000489142 POLR3KQ9Y2Y1 108 aaPredicted RBP11.71□□□□□ -0.53
VTI1A-206ENST00000489142 ANK2Q01484 3957 aa11.71□□□□□ -0.54
VTI1A-206ENST00000489142 PPIAL4CA0A0B4J2A2 164 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 HAX1O00165 279 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 GMDSO60547 372 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 HMGN1P05114 100 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 MRPL3P09001 348 aaKnown RBP11.7□□□□□ -0.54
VTI1A-206ENST00000489142 ANXA8P13928 327 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 SLC2A5P22732 501 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 PITPNBP48739 271 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 DAPP51397 102 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 HILS1P60008 231 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 PAX2Q02962 417 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 POU4F2Q12837 409 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 BNIP1Q12981 228 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 APOFQ13790 326 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 LRRN1Q6UXK5 716 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 SHFQ7M4L6 423 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 WDR86Q86TI4 376 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 BCL6BQ8N143 479 aaPredicted RBP11.7□□□□□ -0.54
VTI1A-206ENST00000489142 OTOSQ8NHW6 89 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 SPSB4Q96A44 273 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 PGAM5Q96HS1 289 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 DUX5Q96PT3 197 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 TTTY10Q9BZA0 68 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 SLC22A4Q9H015 551 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 PAPOLBQ9NRJ5 636 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms