RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 C19orf18Q8NEA5 215 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 OR56B2PQ8NGI1 322 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 PLEKHA8Q96JA3 519 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 INTS14Q96SY0 518 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 OPA3Q9H6K4 179 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 FN3KRPQ9HA64 309 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 MRPL15Q9P015 296 aaKnown RBP19.23■□□□□ 0.67
COL9A3-213ENST00000489045 PDP1Q9P0J1 537 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-213ENST00000489045 NUP50Q9UKX7 468 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 XRCC2O43543 280 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 GMDSO60547 372 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 CD80P33681 288 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 SLC15A1P46059 708 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 PITPNBP48739 271 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 CX3CR1P49238 355 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 GRB2P62993 217 aaKnown RBP19.22■□□□□ 0.67
COL9A3-213ENST00000489045 HOXA4Q00056 320 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-213ENST00000489045 LYPD2Q6UXB3 125 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 DCDC5Q6ZRR9 648 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 NLRC3Q7RTR2 1065 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 TRPM8Q7Z2W7 1104 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 ZDHHC22Q8N966 263 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 ZNF69Q9UC07 566 aa19.22■□□□□ 0.67
COL9A3-213ENST00000489045 NBEAL1Q6ZS30 2694 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 IGHV2-70DA0A0C4DH43 119 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 TBX1O43435 398 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 GLCEO94923 617 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 POU1F1P28069 291 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 HSD11B1P28845 292 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 GSTT1P30711 240 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 PAX8Q06710 450 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 BTNL3Q6UXE8 466 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 RNF133Q8WVZ7 376 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 ABHD6Q9BV23 337 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 TOR3AQ9H497 397 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 MARCH7Q9H992 704 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 NTN4Q9HB63 628 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 RNF7Q9UBF6 113 aa19.21■□□□□ 0.67
COL9A3-213ENST00000489045 E2F6O75461 281 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 PTBP3O95758 552 aaKnown RBP19.2■□□□□ 0.66
COL9A3-213ENST00000489045 ANXA2P07355 339 aaKnown RBP19.2■□□□□ 0.66
COL9A3-213ENST00000489045 PAICSP22234 425 aaKnown RBP19.2■□□□□ 0.66
COL9A3-213ENST00000489045 FLOT2Q14254 428 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 GINS1Q14691 196 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 DNAL1Q4LDG9 190 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 SPATA24Q86W54 205 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 HS3ST5Q8IZT8 346 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 SIGLECL1Q8N7X8 197 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 RAB40AQ8WXH6 277 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 SPSB4Q96A44 273 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 DACT3Q96B18 629 aaPredicted RBP19.2■□□□□ 0.66
COL9A3-213ENST00000489045 AMELYQ99218 206 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 OR51V1Q9H2C8 321 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 CLN8Q9UBY8 286 aa19.2■□□□□ 0.66
COL9A3-213ENST00000489045 GYG2O15488 501 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 HOXB6P17509 224 aaKnown RBP19.19■□□□□ 0.66
COL9A3-213ENST00000489045 UBA52P62987 128 aaKnown RBP19.19■□□□□ 0.66
COL9A3-213ENST00000489045 TIGD6Q17RP2 521 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 TUSC1Q2TAM9 212 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 LRRN1Q6UXK5 716 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 SHFQ7M4L6 423 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 TIGD4Q8IY51 512 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 BOLLQ8N9W6 283 aaKnown RBP19.19■□□□□ 0.66
COL9A3-213ENST00000489045 SPERTQ8NA61 448 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 PLPP7Q8NBV4 271 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 GCDHQ92947 438 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-213ENST00000489045 ZNF556Q9HAH1 456 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 DNAJC27Q9NZQ0 273 aa19.19■□□□□ 0.66
COL9A3-213ENST00000489045 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-213ENST00000489045 TMEM89A2RUT3 159 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 PRR23D1E9PI22 279 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-213ENST00000489045 PHYHO14832 338 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 PRR23D2P0DMB1 279 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-213ENST00000489045 CFPP27918 469 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 WDR25Q64LD2 544 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-213ENST00000489045 SFRP4Q6FHJ7 346 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-213ENST00000489045 PLBD1Q6P4A8 553 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 RBMS3Q6XE24 437 aaKnown RBP19.18■□□□□ 0.66
COL9A3-213ENST00000489045 ZNF841Q6ZN19 808 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 FAM57BQ71RH2 274 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 DOK3Q7L591 496 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 SLC16A9Q7RTY1 509 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 BCL6BQ8N143 479 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-213ENST00000489045 BCAS4Q8TDM0 211 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 ZMYND19Q96E35 227 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-213ENST00000489045 REEP6Q96HR9 211 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 MMADHCQ9H3L0 296 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-213ENST00000489045 SP140LQ9H930 580 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 C1orf123Q9NWV4 160 aa19.18■□□□□ 0.66
COL9A3-213ENST00000489045 LGALS8O00214 317 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 APOC1P02654 83 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 GRPP07492 148 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 PPIAL4GP0DN37 164 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 IGHV4-38-2P0DP08 117 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 OSMP13725 252 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 PRKACGP22612 351 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 DDOSTP39656 456 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 PSMB10P40306 273 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 OPRL1P41146 370 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 COMPP49747 757 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms