RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 FRZBQ92765 325 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 TM4SF18Q96CE8 201 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 SGTBQ96EQ0 304 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 BMFQ96LC9 184 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 GLT1D1Q96MS3 346 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 SPIN2AQ99865 258 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 SPIN2BQ9BPZ2 258 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 AGMATQ9BSE5 352 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 NAA50Q9GZZ1 169 aaKnown RBP1.88□□□□□ -2.11
RFC4-213ENST00000489028 MYOZ1Q9NP98 299 aaPredicted RBP1.88□□□□□ -2.11
RFC4-213ENST00000489028 AGPAT3Q9NRZ7 376 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 MTFP1Q9UDX5 166 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 MROH7Q68CQ1 1323 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 TET2Q6N021 2002 aaPredicted RBP1.88□□□□□ -2.11
RFC4-213ENST00000489028 H7C1H1 209 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 YKT6O15498 198 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 SLC16A7O60669 478 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 SEMA3DO95025 777 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 PLEKHA8P1O95397 391 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 CTDNEP1O95476 244 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 IGKV1-17P01599 117 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 PGA4P0DJD7 388 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 PGA3P0DJD8 388 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 PGA5P0DJD9 388 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 CD37P11049 281 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 TCP1P17987 556 aaKnown RBP1.87□□□□□ -2.11
RFC4-213ENST00000489028 HTR1DP28221 377 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 DEKP35659 375 aaKnown RBP1.87□□□□□ -2.11
RFC4-213ENST00000489028 ARR3P36575 388 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 RBM34P42696 430 aaKnown RBP1.87□□□□□ -2.11
RFC4-213ENST00000489028 PPICP45877 212 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 SERPINB8P50452 374 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 HADHBP55084 474 aaKnown RBP1.87□□□□□ -2.11
RFC4-213ENST00000489028 SYNJ2BPP57105 145 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 TAS2R60P59551 318 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 OR2B8PP59922 312 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 RPS23P62266 143 aaKnown RBP1.87□□□□□ -2.11
RFC4-213ENST00000489028 DGCR6Q14129 220 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 RCAN2Q14206 197 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 ZNF266Q14584 549 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 ATP6V1FQ16864 119 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 FHOD3Q2V2M9 1422 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 TCEAL5Q5H9L2 206 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 C16orf87Q6PH81 154 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 PLET1Q6UQ28 207 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 FBXW12Q6X9E4 464 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 TMPRSS11AQ6ZMR5 421 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 FAM92BQ6ZTR7 304 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 NDUFAF7Q7L592 441 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 PID1Q7Z2X4 250 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 SNX20Q7Z614 316 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 FAM86B1Q8N7N1 296 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 LINC00469Q8N7U9 141 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 COX18Q8N8Q8 333 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 OR10AD1Q8NGE0 317 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 OR10G6Q8NH81 332 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 ASZ1Q8WWH4 475 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 BAALCQ8WXS3 180 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 TCEAL3Q969E4 200 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 HAUS1Q96CS2 278 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 DYNLL2Q96FJ2 89 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 RNF170Q96K19 258 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 RNF145Q96MT1 663 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 ZNF681Q96N22 645 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 SCGB3A2Q96PL1 93 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 ZNF317Q96PQ6 595 aaPredicted RBP1.87□□□□□ -2.11
RFC4-213ENST00000489028 SPNS1Q9H2V7 528 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 SAV1Q9H4B6 383 aaPredicted RBP1.87□□□□□ -2.11
RFC4-213ENST00000489028 SYNDIG1Q9H7V2 258 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 EDA2RQ9HAV5 297 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 NOX3Q9HBY0 568 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 VCX3AQ9NNX9 186 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 ZMAT5Q9UDW3 170 aaKnown RBP1.87□□□□□ -2.11
RFC4-213ENST00000489028 HYOU1Q9Y4L1 999 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 IGSF9BQ9UPX0 1349 aa1.87□□□□□ -2.11
RFC4-213ENST00000489028 SBNO1A3KN83 1393 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 IGLV1-50A0A075B6I6 118 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 IGHV5-51A0A0C4DH38 117 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 DFFAO00273 331 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 RFXANKO14593 260 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 RAD1O60671 282 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 PTHP01270 115 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 GCGP01275 180 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 BCHEP06276 602 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 CTSLP07711 333 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 RHOCP08134 193 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 ZNF14P17017 642 aaPredicted RBP1.86□□□□□ -2.11
RFC4-213ENST00000489028 PSMC3P17980 439 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 TCN2P20062 427 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 DTYMKP23919 212 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 SSTR5P35346 364 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 ARL2P36404 184 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 RAP1AP62834 184 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 TNNC1P63316 161 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 SLC35B1P78383 322 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 XIAPP98170 497 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 PON2Q15165 354 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 KRTAP13-2Q52LG2 175 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 GCSAMLQ5JQS6 135 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 AVPI1Q5T686 147 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms