RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ALKBH6Q3KRA9 238 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 DMKNQ6E0U4 476 aaPredicted RBP10.58□□□□□ -0.72
TRAIP-209ENST00000488860 LRP11Q86VZ4 500 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 C1orf174Q8IYL3 243 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 BHLHE23Q8NDY6 225 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 OR13C5Q8NGS8 318 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 LILRB1Q8NHL6 650 aaPredicted RBP10.58□□□□□ -0.72
TRAIP-209ENST00000488860 SYNPRQ8TBG9 265 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 KLF14Q8TD94 323 aaPredicted RBP10.58□□□□□ -0.72
TRAIP-209ENST00000488860 TMEM171Q8WVE6 324 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 FBXW5Q969U6 566 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 MUL1Q969V5 352 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 MARVELD3Q96A59 401 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 SGK3Q96BR1 496 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 CMBLQ96DG6 245 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 MARS2Q96GW9 593 aaKnown RBP10.58□□□□□ -0.72
TRAIP-209ENST00000488860 SOX7Q9BT81 388 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 TMED9Q9BVK6 235 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 CLEC4MQ9H2X3 399 aaPredicted RBP10.58□□□□□ -0.72
TRAIP-209ENST00000488860 RGCCQ9H4X1 137 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 OPA3Q9H6K4 179 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 ZNF442Q9H7R0 627 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 PLEKHA1Q9HB21 404 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 ISYNA1Q9NPH2 558 aa10.58□□□□□ -0.72
TRAIP-209ENST00000488860 USP9YO00507 2555 aaPredicted RBP10.57□□□□□ -0.72
TRAIP-209ENST00000488860 hCG_38984A0A1B0GV85 526 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 VSTM5A8MXK1 200 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 HS3ST1O14792 307 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 CTAG2O75638 210 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 CLPTM1O96005 669 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 OR4A8P0C604 315 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 CPEP16870 476 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 CFL1P23528 166 aaKnown RBP10.57□□□□□ -0.72
TRAIP-209ENST00000488860 GP2P55259 537 aaKnown RBP10.57□□□□□ -0.72
TRAIP-209ENST00000488860 SELENOVP59797 346 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 RPS25P62851 125 aaKnown RBP10.57□□□□□ -0.72
TRAIP-209ENST00000488860 ADIPOQQ15848 244 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 TMEM244Q5VVB8 128 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 MBNL2Q5VZF2 373 aaKnown RBP10.57□□□□□ -0.72
TRAIP-209ENST00000488860 ZNF787Q6DD87 383 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 OR2T2Q6IF00 324 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 FBXW12Q6X9E4 464 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 DOK3Q7L591 496 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 FBXL14Q8N1E6 418 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 OR56B2PQ8NGI1 322 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 OR51A4Q8NGJ6 313 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 OR13C3Q8NGS6 347 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 OR10AC1Q8NH08 325 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 RPS4Y2Q8TD47 263 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 GHSRQ92847 366 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 MRPL24Q96A35 216 aaKnown RBP10.57□□□□□ -0.72
TRAIP-209ENST00000488860 SPSB4Q96A44 273 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 PGLYRP3Q96LB9 341 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 DHRS9Q9BPW9 319 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 MRPL37Q9BZE1 423 aaKnown RBP10.57□□□□□ -0.72
TRAIP-209ENST00000488860 PLK3Q9H4B4 646 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 MYEF2Q9P2K5 600 aaKnown RBP10.57□□□□□ -0.72
TRAIP-209ENST00000488860 SCOCQ9UIL1 159 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 ZNF391Q9UJN7 358 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 HHLA2Q9UM44 414 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 DSCAMO60469 2012 aa10.57□□□□□ -0.72
TRAIP-209ENST00000488860 A0A1B0GTI1 187 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 TRIM64CA6NLI5 447 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 H3BSA7 217 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 PLPP2O43688 288 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 LMX1BO60663 402 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 MTRF1O75570 445 aaKnown RBP10.56□□□□□ -0.72
TRAIP-209ENST00000488860 DHRS3O75911 302 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 IGLV3-1P01715 115 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 RAC2P15153 192 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 SELEP16581 610 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 TUBG1P23258 451 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 APOBEC3AP31941 199 aaPredicted RBP10.56□□□□□ -0.72
TRAIP-209ENST00000488860 SOX2P48431 317 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 GSK3AP49840 483 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 FAM3AP98173 230 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 PSG7Q13046 419 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 NKPD1Q17RQ9 610 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 TMEM255AQ5JRV8 349 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 RGP1Q92546 391 aaPredicted RBP10.56□□□□□ -0.72
TRAIP-209ENST00000488860 TMEM203Q969S6 136 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 REPIN1Q9BWE0 567 aaKnown RBP10.56□□□□□ -0.72
TRAIP-209ENST00000488860 TUBG2Q9NRH3 451 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 TAAR3PQ9P1P4 343 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 PURGQ9UJV8 347 aaKnown RBP10.56□□□□□ -0.72
TRAIP-209ENST00000488860 DHDHQ9UQ10 334 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 PIGLQ9Y2B2 252 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 ZNF281Q9Y2X9 895 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 ABCA4P78363 2273 aa10.56□□□□□ -0.72
TRAIP-209ENST00000488860 FASNP49327 2511 aaKnown RBP10.56□□□□□ -0.72
TRAIP-209ENST00000488860 FAM221AA4D161 298 aa10.55□□□□□ -0.72
TRAIP-209ENST00000488860 A6NIN4 97 aa10.55□□□□□ -0.72
TRAIP-209ENST00000488860 CD300LBA8K4G0 201 aa10.55□□□□□ -0.72
TRAIP-209ENST00000488860 CCRL2O00421 344 aa10.55□□□□□ -0.72
TRAIP-209ENST00000488860 ISG15P05161 165 aa10.55□□□□□ -0.72
TRAIP-209ENST00000488860 OCM2P0CE71 109 aa10.55□□□□□ -0.72
TRAIP-209ENST00000488860 ZNF250P15622 560 aa10.55□□□□□ -0.72
TRAIP-209ENST00000488860 FAHP16930 419 aa10.55□□□□□ -0.72
TRAIP-209ENST00000488860 ZNF20P17024 532 aa10.55□□□□□ -0.72
TRAIP-209ENST00000488860 CCL1P22362 96 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms