RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ZNF645Q8N7E2 425 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 C19orf18Q8NEA5 215 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 OR6Q1Q8NGQ2 317 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 OR1J4Q8NGS1 313 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 OR1L1Q8NH94 360 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 OR5K2Q8NHB8 316 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 APH1BQ8WW43 257 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 CAPSLQ8WWF8 208 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 NRBF2Q96F24 287 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 KCNS1Q96KK3 526 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 BTN2A3PQ96KV6 586 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 TMEM243Q9BU79 118 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 PKIBQ9C010 78 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 TOLLIPQ9H0E2 274 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 PLEKHF2Q9H8W4 249 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 COMMD3-BMI1R4GMX3 469 aa0.88□□□□□ -2.27
SMC4-219ENST00000487747 H0Y8G0 127 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 CHMP2AO43633 222 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 SERPINB7O75635 380 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 PALMO75781 387 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 IGLV7-43P04211 117 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 UQCRFS1P1P0C7P4 283 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 ZNF24P17028 368 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 NELFEP18615 380 aaKnown RBP0.87□□□□□ -2.27
SMC4-219ENST00000487747 HTR1DP28221 377 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 OR1E1P30953 314 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 RRM2P31350 389 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 CD70P32970 193 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 SULT1E1P49888 294 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 ZNF121P58317 390 aaPredicted RBP0.87□□□□□ -2.27
SMC4-219ENST00000487747 CYP24A1Q07973 514 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 DGCR6Q14129 220 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 TRAM2Q15035 370 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 NCF4Q15080 339 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 SLC9A3R2Q15599 337 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 MAJINQ3KP22 176 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 SLC25A35Q3KQZ1 300 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 HSDL1Q3SXM5 330 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 ZFAND6Q6FIF0 208 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 MRPL55Q7Z7F7 128 aaKnown RBP0.87□□□□□ -2.27
SMC4-219ENST00000487747 ERO1BQ86YB8 467 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 CBR4Q8N4T8 237 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 GPR26Q8NDV2 337 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 OR4A4PQ8NGN8 299 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 CMTM2Q8TAZ6 248 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 ZNF606Q8WXB4 792 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 SLC38A4Q969I6 547 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 C1orf50Q9BV19 199 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 CSNK1G1Q9HCP0 422 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 MYOZ1Q9NP98 299 aaPredicted RBP0.87□□□□□ -2.27
SMC4-219ENST00000487747 IL37Q9NZH6 218 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 SLC17A4Q9Y2C5 497 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 ZBED9Q6R2W3 1325 aa0.87□□□□□ -2.27
SMC4-219ENST00000487747 HEATR9A2RTY3 570 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 CDC40O60508 579 aaKnown RBP eCLIP0.86□□□□□ -2.27
SMC4-219ENST00000487747 NMT2O60551 498 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 HPRT1P00492 218 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 MT-ND4P03905 459 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 CD28P10747 220 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 RAB4AP20338 218 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 IL32P24001 234 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 OTX1P32242 354 aaPredicted RBP0.86□□□□□ -2.27
SMC4-219ENST00000487747 PFN2P35080 140 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 TALDO1P37837 337 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 NDUFA8P51970 172 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 CMC4P56277 68 aaPredicted RBP0.86□□□□□ -2.27
SMC4-219ENST00000487747 ATP5IP56385 69 aaPredicted RBP0.86□□□□□ -2.27
SMC4-219ENST00000487747 EIF3EP60228 445 aaKnown RBP0.86□□□□□ -2.27
SMC4-219ENST00000487747 PSMD5Q16401 504 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 MRPL23Q16540 153 aaKnown RBP0.86□□□□□ -2.27
SMC4-219ENST00000487747 SP6Q3SY56 376 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 TPTE2P1Q5T6R2 138 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 RTL4Q6ZR62 310 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 SLC26A10Q8NG04 563 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 OR2Z1Q8NG97 314 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 OR10W1Q8NGF6 305 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 MUC7Q8TAX7 377 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 OR51E1Q8TCB6 317 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 HAUS1Q96CS2 278 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 CSPG4P5Q96PW8 444 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 TGS1Q96RS0 853 aaKnown RBP0.86□□□□□ -2.27
SMC4-219ENST00000487747 CENPKQ9BS16 269 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 SLIRPQ9GZT3 109 aaKnown RBP0.86□□□□□ -2.27
SMC4-219ENST00000487747 TMEM38AQ9H6F2 299 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 RRAGDQ9NQL2 400 aaPredicted RBP0.86□□□□□ -2.27
SMC4-219ENST00000487747 ASF1BQ9NVP2 202 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 ZNF337Q9Y3M9 751 aa0.86□□□□□ -2.27
SMC4-219ENST00000487747 RPRD2Q5VT52 1461 aaKnown RBP0.86□□□□□ -2.27
SMC4-219ENST00000487747 PRAMEF26H0Y7S4 382 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 DNALI1O14645 258 aaPredicted RBP0.85□□□□□ -2.27
SMC4-219ENST00000487747 RAD1O60671 282 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 GATBO75879 557 aaKnown RBP0.85□□□□□ -2.27
SMC4-219ENST00000487747 OR2F2O95006 317 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 OXTP01178 125 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 PGA4P0DJD7 388 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 PGA3P0DJD8 388 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 PGA5P0DJD9 388 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 CSNK2A2P19784 350 aaPredicted RBP0.85□□□□□ -2.27
SMC4-219ENST00000487747 USF1P22415 310 aaPredicted RBP0.85□□□□□ -2.27
SMC4-219ENST00000487747 PBLDP30039 288 aaPredicted RBP0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms