RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 KIF13BQ9NQT8 1826 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 IGKV1D-13A0A0B4J2D9 117 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 IGHV3-66A0A0C4DH42 116 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 A0A1B0GUH1 482 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 INS-IGF2F8WCM5 200 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 OR2J3O76001 311 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 C1orf105O95561 183 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 TSPAN13O95857 204 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 NPPAP01160 153 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 SERPINE2P07093 398 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 CISD3P0C7P0 127 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 IGKV1-13P0DP09 117 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 PRPS2P11908 318 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 NUP62P37198 522 aaPredicted RBP2.24□□□□□ -2.05
TTC3-220ENST00000487711 CYB561P49447 251 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 CCR8P51685 355 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 RAB10P61026 200 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 RPS21P63220 83 aaKnown RBP2.24□□□□□ -2.05
TTC3-220ENST00000487711 SLC7A9P82251 487 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 SLC39A6Q13433 755 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 HNRNPA1L2Q32P51 320 aaKnown RBP2.24□□□□□ -2.05
TTC3-220ENST00000487711 SPECC1LQ69YQ0 1117 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 CERS6Q6ZMG9 384 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 FAM92BQ6ZTR7 304 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 STRADAQ7RTN6 431 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 NIPA1Q7RTP0 329 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 VTCN1Q7Z7D3 282 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 LYPD1Q8N2G4 141 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 ZNF709Q8N972 641 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 C8orf31Q8N9H6 132 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 B3GNT7Q8NFL0 401 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 OR9G4Q8NGQ1 327 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 OR5W2Q8NH69 310 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 PLPPR1Q8TBJ4 325 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 CCDC12Q8WUD4 166 aaPredicted RBP2.24□□□□□ -2.05
TTC3-220ENST00000487711 RAB1CQ92928 201 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 CIDECQ96AQ7 238 aaPredicted RBP2.24□□□□□ -2.05
TTC3-220ENST00000487711 KIAA1143Q96AT1 154 aaPredicted RBP2.24□□□□□ -2.05
TTC3-220ENST00000487711 MED8Q96G25 268 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 LINC00477Q96M19 166 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 OR2A5Q96R48 311 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 OR8B4Q96RC9 309 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 SORT1Q99523 831 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 LZTS2Q9BRK4 669 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 OSBPL10Q9BXB5 764 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 TEKT3Q9BXF9 490 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 UGT1A7Q9HAW7 530 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 UGT1A10Q9HAW8 530 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 UGT1A8Q9HAW9 530 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 GPATCH2LQ9NWQ4 482 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 ZNF629Q9UEG4 869 aaPredicted RBP2.24□□□□□ -2.05
TTC3-220ENST00000487711 NUP50Q9UKX7 468 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 LTBP4Q8N2S1 1624 aa2.24□□□□□ -2.05
TTC3-220ENST00000487711 MN1Q10571 1320 aaPredicted RBP2.23□□□□□ -2.05
TTC3-220ENST00000487711 ZNF532Q9HCE3 1301 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 MYH8P13535 1937 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 CDK5RAP2Q96SN8 1893 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 TRBV9A0A0B4J1U6 114 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 IGHV5-51A0A0C4DH38 117 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 LOC100506127A0A0U1RQW1 187 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 KBTBD11-OT1A0A1B0GTJ5 212 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 A0A1B0GVI7 797 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 A0A1W2PPV4 95 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 LSM1O15116 133 aaKnown RBP2.23□□□□□ -2.05
TTC3-220ENST00000487711 KMOO15229 486 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 EIF3HO15372 352 aaKnown RBP eCLIP2.23□□□□□ -2.051e-6■■□□□ 13.1
TTC3-220ENST00000487711 NVLO15381 856 aaKnown RBP2.23□□□□□ -2.05
TTC3-220ENST00000487711 YKT6O15498 198 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 OR7A10O76100 309 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 TGM6O95932 706 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 FGF1P05230 155 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 CLTAP09496 248 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 CCDC172P0C7W6 258 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 STAG3L2P0CL84 134 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 ZNF24P17028 368 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 PRKACBP22694 351 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 NPY1RP25929 384 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 RRM2P31350 389 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 IFNA8P32881 189 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 HSD17B2P37059 387 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 NSG1P42857 185 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 UQCRFS1P47985 274 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 CCNG1P51959 295 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 NDUFA8P51970 172 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 XIAPP98170 497 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 PRPSAP1Q14558 356 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 Q3ZCU0 254 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 XKR4Q5GH76 650 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 BEX5Q5H9J7 111 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 HES5Q5TA89 166 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 KRT222Q8N1A0 295 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 ZNF557Q8N988 423 aaPredicted RBP2.23□□□□□ -2.05
TTC3-220ENST00000487711 OR4A4PQ8NGN8 299 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 RHEBL1Q8TAI7 183 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 LKAAEAR1Q8TD35 194 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.23□□□□□ -2.05
TTC3-220ENST00000487711 ITFG2Q969R8 447 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 HSFY1Q96LI6 401 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 FAIM2Q9BWQ8 316 aa2.23□□□□□ -2.05
TTC3-220ENST00000487711 LINC00597Q9H2U6 94 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms