RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TEX30Q5JUR7 227 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 CD276Q5ZPR3 534 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 WDR25Q64LD2 544 aaPredicted RBP10.39□□□□□ -0.75
SREBF1-215ENST00000487401 LYPD2Q6UXB3 125 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 SPATC1Q76KD6 591 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 PLPP7Q8NBV4 271 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 C19orf18Q8NEA5 215 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 OR6K6Q8NGW6 343 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 OR4Q3Q8NH05 313 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 SLC25A28Q96A46 364 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 OTULINQ96BN8 352 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 UPRTQ96BW1 309 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 LRGUKQ96M69 825 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 ZNF48Q96MX3 618 aaPredicted RBP10.39□□□□□ -0.75
SREBF1-215ENST00000487401 TECTBQ96PL2 329 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 KCNJ15Q99712 375 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 DGCR6LQ9BY27 220 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 OPA3Q9H6K4 179 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 SP140LQ9H930 580 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 TRIM36Q9NQ86 728 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 ARMC1Q9NVT9 282 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 C1orf123Q9NWV4 160 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 ERVK-18Q9QC07 812 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 COMMD3-BMI1R4GMX3 469 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 U3KQV3 271 aa10.39□□□□□ -0.75
SREBF1-215ENST00000487401 TRAV38-1A0A0B4J264 116 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 TCRBV5S2A0A599 114 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 A6NLC8 198 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 ANKRD30BLA7E2S9 258 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 ZNF878C9JN71 531 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 TBX1O43435 398 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 SPRY1O43609 319 aaPredicted RBP10.38□□□□□ -0.75
SREBF1-215ENST00000487401 NDUFA2O43678 99 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 ENSAO43768 121 aaKnown RBP10.38□□□□□ -0.75
SREBF1-215ENST00000487401 SLC2A1P11166 492 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 ZNF3P17036 446 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 OTX1P32242 354 aaPredicted RBP10.38□□□□□ -0.75
SREBF1-215ENST00000487401 DDOSTP39656 456 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 NPY4RP50391 375 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 GRB2P62993 217 aaKnown RBP10.38□□□□□ -0.75
SREBF1-215ENST00000487401 EIF2B1Q14232 305 aaKnown RBP10.38□□□□□ -0.75
SREBF1-215ENST00000487401 PCK2Q16822 640 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 TUSC1Q2TAM9 212 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 SFRP4Q6FHJ7 346 aaPredicted RBP10.38□□□□□ -0.75
SREBF1-215ENST00000487401 LCN8Q6JVE9 175 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 CCDC121Q6ZUS5 278 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 FITM2Q8N6M3 262 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 ZDHHC16Q969W1 377 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 NMNAT2Q9BZQ4 307 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 C14orf119Q9NWQ9 140 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 VNN3Q9NY84 501 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 KIF17Q9P2E2 1029 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 PCDHGB1Q9Y5G3 927 aa10.38□□□□□ -0.75
SREBF1-215ENST00000487401 hCG_1807616A0A1W2PRN6 198 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 DHRS12A0PJE2 317 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 C5orf63A6NC05 138 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 H3BN98 237 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 CLDN34H7C241 214 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 ADAM20O43506 726 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 XRCC2O43543 280 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 APOC1P02654 83 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 ANXA2P07355 339 aaKnown RBP10.37□□□□□ -0.75
SREBF1-215ENST00000487401 RNASE1P07998 156 aaKnown RBP10.37□□□□□ -0.75
SREBF1-215ENST00000487401 CLUP10909 449 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 HSD11B1P28845 292 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 PSMB10P40306 273 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 FGF12P61328 243 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 SLC9A3R2Q15599 337 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 TIGD6Q17RP2 521 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 SHISA2Q6UWI4 295 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 ZNF841Q6ZN19 808 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 C9orf139Q6ZV77 190 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 CCDC197Q8NCU1 140 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 OR10G2Q8NGC3 310 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 OR56B2PQ8NGI1 322 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 OR8S1Q8NH09 359 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 TEX47Q8TBZ9 253 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 GIPC3Q8TF64 312 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 INTS14Q96SY0 518 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 ZNF747Q9BV97 191 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 TOR3AQ9H497 397 aa10.37□□□□□ -0.75
SREBF1-215ENST00000487401 SOX21Q9Y651 276 aaPredicted RBP10.37□□□□□ -0.75
SREBF1-215ENST00000487401 TENM1Q9UKZ4 2725 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 TRAV40A0A0B4J280 105 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 OOEPA6NGQ2 149 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 GNGT2O14610 69 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 PTBP3O95758 552 aaKnown RBP10.36□□□□□ -0.75
SREBF1-215ENST00000487401 PLATP00750 562 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 LIPFP07098 398 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 RAP2AP10114 183 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 PSKH1P11801 424 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 EGR1P18146 543 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 CALB2P22676 271 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 GSTT1P30711 240 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 GRK5P34947 590 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 CX3CR1P49238 355 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 BPIFB3P59826 476 aa10.36□□□□□ -0.75
SREBF1-215ENST00000487401 HOXA4Q00056 320 aaPredicted RBP10.36□□□□□ -0.75
SREBF1-215ENST00000487401 MS4A2Q01362 244 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms