RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SAMHD1Q9Y3Z3 626 aaKnown RBP20.44■□□□□ 0.86
LIME1-206ENST00000487026 MDFIC2A0A1B0GVS7 189 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 C22orf46C9J442 243 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 PLATP00750 562 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 GRPP07492 148 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 MTNR1AP48039 350 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 FGF12P61328 243 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 PCK2Q16822 640 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 OR2T5Q6IEZ7 315 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 BRD3OSQ6XYD6 125 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 ZNF826PQ6ZT77 177 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 OR2T33Q8NG76 320 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 OR56B2PQ8NGI1 322 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 OR2T29Q8NH02 315 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 TECTBQ96PL2 329 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 MAGIXQ9H6Y5 334 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 REEP1Q9H902 201 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 MED20Q9H944 212 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 C1orf123Q9NWV4 160 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 CTSZQ9UBR2 303 aa20.43■□□□□ 0.86
LIME1-206ENST00000487026 NOP16Q9Y3C1 178 aaKnown RBP20.43■□□□□ 0.86
LIME1-206ENST00000487026 PHYHO14832 338 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 SLC25A1P53007 311 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 TRIM25Q14258 630 aaKnown RBP20.42■□□□□ 0.86
LIME1-206ENST00000487026 OR8B8Q15620 311 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 LCN8Q6JVE9 175 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 C9orf139Q6ZV77 190 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 SLC25A28Q96A46 364 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 ZNF747Q9BV97 191 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 DGCR6LQ9BY27 220 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 RASSF4Q9H2L5 321 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 ZMAT3Q9HA38 289 aaKnown RBP20.42■□□□□ 0.86
LIME1-206ENST00000487026 MRPL15Q9P015 296 aaKnown RBP20.42■□□□□ 0.86
LIME1-206ENST00000487026 BAIAP2Q9UQB8 552 aa20.42■□□□□ 0.86
LIME1-206ENST00000487026 DHRS12A0PJE2 317 aa20.41■□□□□ 0.86
LIME1-206ENST00000487026 LGALS8O00214 317 aa20.41■□□□□ 0.86
LIME1-206ENST00000487026 TBX1O43435 398 aa20.41■□□□□ 0.86
LIME1-206ENST00000487026 PTBP3O95758 552 aaKnown RBP20.41■□□□□ 0.86
LIME1-206ENST00000487026 RNASE1P07998 156 aaKnown RBP20.41■□□□□ 0.86
LIME1-206ENST00000487026 POU4F2Q12837 409 aa20.41■□□□□ 0.86
LIME1-206ENST00000487026 EIF2B1Q14232 305 aaKnown RBP20.41■□□□□ 0.86
LIME1-206ENST00000487026 TEX30Q5JUR7 227 aa20.41■□□□□ 0.86
LIME1-206ENST00000487026 IQCF1Q8N6M8 205 aa20.41■□□□□ 0.86
LIME1-206ENST00000487026 CCT8L2Q96SF2 557 aa20.41■□□□□ 0.86
LIME1-206ENST00000487026 NIPSNAP1Q9BPW8 284 aa20.41■□□□□ 0.86
LIME1-206ENST00000487026 MGAM2Q2M2H8 2515 aa20.41■□□□□ 0.86
LIME1-206ENST00000487026 FAM183AA6NL82 134 aa20.4■□□□□ 0.86
LIME1-206ENST00000487026 ZNF878C9JN71 531 aa20.4■□□□□ 0.86
LIME1-206ENST00000487026 ADAM20O43506 726 aa20.4■□□□□ 0.86
LIME1-206ENST00000487026 FAM98BQ52LJ0 330 aaKnown RBP20.4■□□□□ 0.86
LIME1-206ENST00000487026 LINC01590Q5TEZ4 76 aa20.4■□□□□ 0.86
LIME1-206ENST00000487026 PLPP7Q8NBV4 271 aa20.4■□□□□ 0.86
LIME1-206ENST00000487026 OTULINQ96BN8 352 aa20.4■□□□□ 0.86
LIME1-206ENST00000487026 ERVK-18Q9QC07 812 aa20.4■□□□□ 0.86
LIME1-206ENST00000487026 A6NLC8 198 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 RIIAD1A6NNX1 92 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 TNFRSF13BO14836 293 aaPredicted RBP20.39■□□□□ 0.85
LIME1-206ENST00000487026 IFNGP01579 166 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 ANXA2P07355 339 aaKnown RBP20.39■□□□□ 0.85
LIME1-206ENST00000487026 CX3CR1P49238 355 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 DEFB112Q30KQ8 113 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 DPY19L4Q7Z388 723 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 ERI1Q8IV48 349 aaKnown RBP20.39■□□□□ 0.85
LIME1-206ENST00000487026 ARHGAP24Q8N264 748 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 SPERTQ8NA61 448 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 OR10G2Q8NGC3 310 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 SGK3Q96BR1 496 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 PCGF1Q9BSM1 259 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 MUC13Q9H3R2 512 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 SMURF1Q9HCE7 757 aa20.39■□□□□ 0.85
LIME1-206ENST00000487026 PKD1L1Q8TDX9 2849 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 hCG_1807616A0A1W2PRN6 198 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 OOEPA6NGQ2 149 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 CLDN34H7C241 214 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 XRCC2O43543 280 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 ENSAO43768 121 aaKnown RBP20.38■□□□□ 0.85
LIME1-206ENST00000487026 GYPAP02724 150 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 SFTPBP07988 381 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 ZNF3P17036 446 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 KCNJ8Q15842 424 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 SLC16A9Q7RTY1 509 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 GCSAMQ8N6F7 178 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 SPSB4Q96A44 273 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 CLPTM1LQ96KA5 538 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 AMELYQ99218 206 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 FEVQ99581 238 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 ABHD6Q9BV23 337 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 PPP1R3EQ9H7J1 279 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 UNKLQ9H9P5 680 aaKnown RBP20.38■□□□□ 0.85
LIME1-206ENST00000487026 CMC2Q9NRP2 79 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 TNFRSF19Q9NS68 423 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 DNAJC27Q9NZQ0 273 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 TRRAPQ9Y4A5 3859 aa20.38■□□□□ 0.85
LIME1-206ENST00000487026 IGHV3OR15-7A0A075B7D8 119 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 TRAV38-1A0A0B4J264 116 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.37■□□□□ 0.85
LIME1-206ENST00000487026 H3BN98 237 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 TMPRSS2O15393 492 aa20.37■□□□□ 0.85
LIME1-206ENST00000487026 HOXA3O43365 443 aaPredicted RBP20.37■□□□□ 0.85
LIME1-206ENST00000487026 T-ENOLP0DO92 83 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms