RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CDK6Q00534 326 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 RBBP4Q09028 425 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 ZP4Q12836 540 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 OR1Q1Q15612 314 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 TIGD6Q17RP2 521 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 HFEQ30201 348 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 GTDC1Q4AE62 458 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 TNFAIP8L3Q5GJ75 292 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 REEP3Q6NUK4 255 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM53Q6P2H8 277 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 RBMS3Q6XE24 437 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 WDR88Q6ZMY6 472 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC35D2Q76EJ3 337 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 NFE4Q86UQ8 179 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF584Q8IVC4 421 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 WDFY1Q8IWB7 410 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 C1orf174Q8IYL3 243 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 BPIFB2Q8N4F0 458 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC22A24Q8N4F4 322 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 MREGQ8N565 214 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 SYT14Q8NB59 555 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 DNAAF1Q8NEP3 725 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC30A7Q8NEW0 376 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 GJC3Q8NFK1 279 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 DMBX1Q8NFW5 382 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 OR1J2Q8NGS2 313 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 OR5J2Q8NH18 312 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 OR6X1Q8NH79 312 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 FGFBP3Q8TAT2 258 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 AENQ8WTP8 325 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 GTF2H4Q92759 462 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 RAB1CQ92928 201 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM54Q969K7 222 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 MAL2Q969L2 176 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 VPS33AQ96AX1 596 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 ELMOD3Q96FG2 381 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 TIMD4Q96H15 378 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC25A44Q96H78 314 aaPredicted RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 GPA33Q99795 319 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC6A7Q99884 636 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 BCL2L14Q9BZR8 327 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 PAIP1Q9H074 479 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 LRMDAQ9H2I8 198 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 CDH20Q9HBT6 801 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 ESM1Q9NQ30 184 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 SDR39U1Q9NRG7 319 aaPredicted RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 DDX28Q9NUL7 540 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM38BQ9NVV0 291 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 GLTPQ9NZD2 209 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 OPN4Q9UHM6 478 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 FZR1Q9UM11 496 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 WIPI2Q9Y4P8 454 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 GMEB1Q9Y692 573 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 TRRAPQ9Y4A5 3859 aa3.31□□□□□ -1.88
SNRNP40-205ENST00000486941 IGKV3D-20A0A0C4DH25 116 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 IQCMA0A1B0GVH7 501 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 FAM90A7PA6NKC0 464 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 KRTAP16-1A8MUX0 517 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 FAM90A22PA8MWA6 464 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 FAM90A12PA8MX19 464 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 FAM90A23PA8MXZ1 464 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 CENPBD1B2RD01 187 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 LRRN3E7EW58 273 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 C11orf98E9PRG8 122 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 CLDN34H7C241 214 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 TPD52L2O43399 206 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 FMO6PO60774 539 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SNNO75324 88 aaPredicted RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 FOXH1O75593 365 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SERPINB7O75635 380 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 MFN2O95140 757 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 CSTBP04080 98 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 QDPRP09417 244 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 CCL2P13500 99 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 GPX2P18283 190 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 PPIBP23284 216 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 PRTN3P24158 256 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 MRPL19P49406 292 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 ATP4BP51164 291 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 MMP15P51511 669 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF133P52736 654 aaPredicted RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC18A1P54219 525 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 RGS8P57771 180 aaPredicted RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 NCALDP61601 193 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC3A1Q07837 685 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 HIST3H3Q16695 136 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 TSTQ16762 297 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 TBC1D28Q2M2D7 210 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 ALKBH6Q3KRA9 238 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC36A2Q495M3 483 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 PDLIM3Q53GG5 364 aaPredicted RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 LRIF1Q5T3J3 769 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 GCNT6Q5T4J0 391 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 AVPI1Q5T686 147 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 HHATQ5VTY9 493 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF613Q6PF04 617 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC16A14Q7RTX9 510 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 CROCCP2Q86T23 111 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms