RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 PLA2G10O15496 165 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 GSTZ1O43708 216 aaPredicted RBP18.86■□□□□ 0.61
TRADD-202ENST00000486556 IL18BPO95998 194 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
TRADD-202ENST00000486556 UCNP55089 124 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 TGFBR3Q03167 851 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 CCBE1Q6UXH8 406 aaPredicted RBP18.86■□□□□ 0.61
TRADD-202ENST00000486556 TFAP2EQ6VUC0 442 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 OR52N4Q8NGI2 321 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 BCL2L2Q92843 193 aaPredicted RBP18.86■□□□□ 0.61
TRADD-202ENST00000486556 ZFP3Q96NJ6 502 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 C1QTNF5Q9BXJ0 243 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 HLA-HP01893 362 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 GABRA1P14867 456 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 RAB1AP62820 205 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 MRPS10P82664 201 aaKnown RBP18.86■□□□□ 0.61
TRADD-202ENST00000486556 HGFACQ04756 655 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 UTS2BQ765I0 119 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 ZNF554Q86TJ5 538 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 NANOS1Q8WY41 292 aaKnown RBP18.86■□□□□ 0.61
TRADD-202ENST00000486556 DIABLOQ9NR28 239 aa18.86■□□□□ 0.61
TRADD-202ENST00000486556 FREM1Q5H8C1 2179 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 XRCC3O43542 346 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 CD79AP11912 226 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 CDK2P24941 298 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 PLP2Q04941 152 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 TMEM69Q5SWH9 247 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 MZT2BQ6NZ67 158 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 COLCA1Q6ZS62 124 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 NRARPQ7Z6K4 114 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 CCDC36Q8IYA8 594 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 OR5AS1Q8N127 324 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 C9orf106Q8NAJ2 232 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 OR6K3Q8NGY3 331 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 REEP6Q96HR9 211 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 CNTD2Q9H8S5 307 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 RHBDD3Q9Y3P4 386 aa18.85■□□□□ 0.61
TRADD-202ENST00000486556 TMEM272A0A1B0GTI8 110 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 PTGER4P35408 488 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 ZNF93P35789 620 aaPredicted RBP18.84■□□□□ 0.61
TRADD-202ENST00000486556 KIR2DL2P43627 348 aaPredicted RBP18.84■□□□□ 0.61
TRADD-202ENST00000486556 RFX2P48378 723 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 TMPRSS3P57727 454 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 ZNF585AQ6P3V2 769 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 Q6ZT83 130 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 GCNT2Q8N0V5 402 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 SEMA6DQ8NFY4 1073 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 TRIM63Q969Q1 353 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 C11orf54Q9H0W9 315 aaPredicted RBP18.84■□□□□ 0.61
TRADD-202ENST00000486556 PIGLQ9Y2B2 252 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 TP53TG5Q9Y2B4 290 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 LINC00854A0A1B0GVQ3 168 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 FUOMA2VDF0 154 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 LDLRAD4O15165 306 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 ZNHIT1O43257 154 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 EEF1E1O43324 174 aaKnown RBP18.84■□□□□ 0.61
TRADD-202ENST00000486556 XRCC2O43543 280 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 MAP2K3P46734 347 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 PTH2RP49190 550 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 ZNF57Q68EA5 555 aaPredicted RBP18.84■□□□□ 0.61
TRADD-202ENST00000486556 FAM180AQ6UWF9 173 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 OR4D6Q8NGJ1 314 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 SMIM4Q8WVI0 70 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 YIPF5Q969M3 257 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 PHF21AQ96BD5 680 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 CHST5Q9GZS9 411 aa18.84■□□□□ 0.61
TRADD-202ENST00000486556 ARHGAP21Q5T5U3 1957 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 DCHS1Q96JQ0 3298 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 MBD3L4A6NDZ8 208 aaPredicted RBP18.83■□□□□ 0.6
TRADD-202ENST00000486556 MBD3L3A6NE82 208 aaPredicted RBP18.83■□□□□ 0.6
TRADD-202ENST00000486556 MBD3L5A6NJ08 208 aaPredicted RBP18.83■□□□□ 0.6
TRADD-202ENST00000486556 WDR1O75083 606 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 CTAG2O75638 210 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 PRF1P14222 555 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 RAB6AP20340 208 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 STOMP27105 288 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 RIPPLY1Q0D2K3 151 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 MBD3L2Q8NHZ7 208 aaPredicted RBP18.83■□□□□ 0.6
TRADD-202ENST00000486556 AKAP1Q92667 903 aaKnown RBP eCLIP18.83■□□□□ 0.6
TRADD-202ENST00000486556 ITFG2Q969R8 447 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 PLSCR4Q9NRQ2 329 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 B3GNT2Q9NY97 397 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 CFAP47Q6ZTR5 3102 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 MED12LQ86YW9 2145 aa18.83■□□□□ 0.6
TRADD-202ENST00000486556 LOC100509620A0A075B734 347 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 GABARAPH6UMI1 98 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 LYRM1O43325 122 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 BPNT1O95861 308 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 HOXB1P14653 301 aaPredicted RBP18.82■□□□□ 0.6
TRADD-202ENST00000486556 BCAP31P51572 246 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 IZUMO1Q8IYV9 350 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 SSC4DQ8WTU2 575 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 EXTL1Q92935 676 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 SPSB4Q96A44 273 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 ZC3HAV1LQ96H79 300 aaKnown RBP18.82■□□□□ 0.6
TRADD-202ENST00000486556 BOD1Q96IK1 185 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 RBFOX1Q9NWB1 397 aaKnown RBP18.82■□□□□ 0.6
TRADD-202ENST00000486556 FBLN5Q9UBX5 448 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 RAB22AQ9UL26 194 aa18.82■□□□□ 0.6
TRADD-202ENST00000486556 A0A0A6YYH2 397 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms