RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 RFESDQ8TAC1 157 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 UBA3Q8TBC4 463 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 ZPLD1Q8TCW7 415 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 SLC37A2Q8TED4 501 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 CAPSLQ8WWF8 208 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 IL1F10Q8WWZ1 152 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 UFD1Q92890 307 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 GMPPAQ96IJ6 420 aaPredicted RBP3.3□□□□□ -1.88
CDC7-204ENST00000486509 CELF6Q96J87 481 aaKnown RBP3.3□□□□□ -1.88
CDC7-204ENST00000486509 C9orf72Q96LT7 481 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 ZNF670Q9BS34 389 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 UCK2Q9BZX2 261 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 WDR13Q9H1Z4 485 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 GOLPH3Q9H4A6 298 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 ZSCAN16Q9H4T2 348 aaPredicted RBP3.3□□□□□ -1.88
CDC7-204ENST00000486509 REEP4Q9H6H4 257 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 ELL3Q9HB65 397 aaPredicted RBP3.3□□□□□ -1.88
CDC7-204ENST00000486509 BEX1Q9HBH7 125 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 TMEM165Q9HC07 324 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 ZC4H2Q9NQZ6 224 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 DDIT4Q9NX09 232 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 CIDEBQ9UHD4 219 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 COPS3Q9UNS2 423 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 SLC22A14Q9Y267 594 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 FARSAQ9Y285 508 aaKnown RBP3.3□□□□□ -1.88
CDC7-204ENST00000486509 SLC17A4Q9Y2C5 497 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 POFUT2Q9Y2G5 429 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 FBXO7Q9Y3I1 522 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 PIKFYVEQ9Y2I7 2098 aa3.3□□□□□ -1.88
CDC7-204ENST00000486509 NUP210LQ5VU65 1888 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 MEGF8Q7Z7M0 2845 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 IGHV3-20A0A0C4DH32 117 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 OR5K4A6NMS3 321 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 KRTAP16-1A8MUX0 517 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 G3V2L1 256 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 GFYI3L273 518 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 CALUO43852 315 aaPredicted RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 KLHL2O95198 593 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 FARS2O95363 451 aaKnown RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 TBX6O95947 436 aaPredicted RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 HLA-HP01893 362 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 NR2C1P13056 603 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 NELFEP18615 380 aaKnown RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 COX5AP20674 150 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 SERPINA2P20848 420 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 IDSP22304 550 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 AK4P27144 223 aaPredicted RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 VHLP40337 213 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 CA7P43166 264 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 KCNJ3P48549 501 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 TDGF1P3P51864 188 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 KPNA2P52292 529 aaKnown RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 CRISP1P54107 249 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 UBE2MP61081 183 aaKnown RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 RND3P61587 244 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 IRX1P78414 480 aaPredicted RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 GNA12Q03113 381 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 STX3Q13277 289 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 OR5I1Q13606 314 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 VAMP3Q15836 100 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 DGUOKQ16854 277 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 FAM219BQ5XKK7 198 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 FRA10AC1Q70Z53 315 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 PID1Q7Z2X4 250 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 RAB43Q86YS6 212 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 NKAIN4Q8IVV8 208 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 ZADH2Q8N4Q0 377 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 TRAM1L1Q8N609 369 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 OR9A4Q8NGU2 314 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 FNDC8Q8TC99 324 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 TCP10LQ8TDR4 215 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 PATE1Q8WXA2 126 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 MYDGFQ969H8 173 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 ECHDC3Q96DC8 303 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 CNRIP1Q96F85 164 aaPredicted RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 FOXN4Q96NZ1 517 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 OR2M4Q96R27 311 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 NAPGQ99747 312 aaPredicted RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 ACTR3CQ9C0K3 210 aaPredicted RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 NAT10Q9H0A0 1025 aaKnown RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 PPDPFQ9H3Y8 114 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 RBKSQ9H477 322 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 FGF20Q9NP95 211 aaPredicted RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 DEPPQ9NTK1 212 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 PAK1IP1Q9NWT1 392 aaPredicted RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 MTRF1LQ9UGC7 380 aaKnown RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 PPP1R3CQ9UQK1 317 aa3.29□□□□□ -1.88
CDC7-204ENST00000486509 SONP18583 2426 aaKnown RBP3.29□□□□□ -1.88
CDC7-204ENST00000486509 DOCK10Q96BY6 2186 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 ANK3Q12955 4377 aaKnown RBP3.28□□□□□ -1.88
CDC7-204ENST00000486509 ANKRD12Q6UB98 2062 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 SVEP1Q4LDE5 3571 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 IGHV4-4A0A075B6R2 117 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 A0A087WW49 117 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 A0A1W2PQ67 120 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 OR5B21A6NL26 309 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 C15orf61A6NNL5 157 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 K7EQD1 137 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 NDUFAB1O14561 156 aa3.28□□□□□ -1.88
CDC7-204ENST00000486509 RFXANKO14593 260 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms