RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ABHD3Q8WU67 409 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 AQP3Q92482 292 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 FAM46BQ96A09 425 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 ZNF845Q96IR2 970 aaPredicted RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 ALKBH3Q96Q83 286 aaPredicted RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 HES7Q9BYE0 225 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 ATG5Q9H1Y0 275 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 ZNF552Q9H707 407 aaPredicted RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 MCUBQ9NWR8 336 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 N6AMT1Q9Y5N5 214 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 A0A0C4DFX4 3053 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 DNAJC13O75165 2243 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 DMDP11532 3685 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 A0A0A6YYJ9 748 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 SPAARA0A1B0GVQ0 90 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 RAB27BO00194 218 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 MRPL33O75394 65 aaKnown RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 NDUFB6O95139 128 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 C1QBP02746 253 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 IL5P05113 134 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 YES1P07947 543 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 AKAIN1P0CW23 69 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 FCGR2AP12318 317 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 TBPP20226 339 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 MPZP25189 248 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 ERP29P30040 261 aaKnown RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 TNFSF10P50591 281 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 TAS2R19P59542 299 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 PPIAP62937 165 aaKnown RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 GALK2Q01415 458 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 PMPCAQ10713 525 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 SLC10A1Q14973 349 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 RBMS2Q15434 407 aaKnown RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 ZNF766Q5HY98 468 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 ZBTB37Q5TC79 503 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 METTL11BQ5VVY1 283 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 COMMD2Q86X83 199 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 TMEM229BQ8NBD8 167 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 PRSS33Q8NF86 280 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 SPSB1Q96BD6 273 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 ZNF837Q96EG3 531 aaPredicted RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 ZNF486Q96H40 463 aaPredicted RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 LYZL4Q96KX0 146 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 C1orf147Q96MC9 270 aaPredicted RBP10.48□□□□□ -0.73
PKP4-213ENST00000486254 OR2H1Q9GZK4 316 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 SLC6A15Q9H2J7 730 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 OR51J1Q9H342 316 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 PLA2G3Q9NZ20 509 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 ZNF224Q9NZL3 707 aa10.48□□□□□ -0.73
PKP4-213ENST00000486254 WDFY4Q6ZS81 3184 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 ARGFXA6NJG6 315 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 F5H5K5 113 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 GMDSO60547 372 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 F10P00742 488 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 CD74P04233 296 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 CELA3AP09093 270 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 MMP7P09237 267 aaPredicted RBP10.47□□□□□ -0.73
PKP4-213ENST00000486254 VSIG8P0DPA2 414 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 SLC2A1P11166 492 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 NAT2P11245 290 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 ZNF32P17041 273 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 RCVRNP35243 200 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 SLC6A9P48067 706 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 UNC119Q13432 240 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 RTP5Q14D33 572 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 PCGF3Q3KNV8 242 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 RNASE12Q5GAN4 147 aaKnown RBP10.47□□□□□ -0.73
PKP4-213ENST00000486254 SLC16A14Q7RTX9 510 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 NOXA1Q86UR1 476 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 LRRC18Q8N456 261 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 PAQR4Q8N4S7 273 aaPredicted RBP10.47□□□□□ -0.73
PKP4-213ENST00000486254 PNLDC1Q8NA58 520 aaKnown RBP10.47□□□□□ -0.73
PKP4-213ENST00000486254 GCDHQ92947 438 aaPredicted RBP10.47□□□□□ -0.73
PKP4-213ENST00000486254 SEH1LQ96EE3 360 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 RNF170Q96K19 258 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 FAM71F1Q96KD3 344 aaPredicted RBP10.47□□□□□ -0.73
PKP4-213ENST00000486254 TECTBQ96PL2 329 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 PRDM14Q9GZV8 571 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 MED28Q9H204 178 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 RANGRFQ9HD47 186 aaPredicted RBP10.47□□□□□ -0.73
PKP4-213ENST00000486254 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.47□□□□□ -0.73
PKP4-213ENST00000486254 ZNF407Q9C0G0 2248 aa10.47□□□□□ -0.73
PKP4-213ENST00000486254 CACNA1GO43497 2377 aa10.46□□□□□ -0.73
PKP4-213ENST00000486254 FAM166BA8MTA8 275 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 SNRPGP15A8MWD9 76 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 ZNF587BE7ETH6 402 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 TNFRSF10AO00220 468 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 TM4SF5O14894 197 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 RGS13O14921 159 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 ICMTO60725 284 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 CEACAM4O75871 244 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 IGHG3P01860 377 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 ITGB2P05107 769 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 GSTP1P09211 210 aaKnown RBP10.46□□□□□ -0.74
PKP4-213ENST00000486254 B4GALT1P15291 398 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 ABOP16442 354 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 CCR6P51684 374 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 ARG2P78540 354 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 ARL6IP1Q15041 203 aa10.46□□□□□ -0.74
PKP4-213ENST00000486254 ZNF260Q3ZCT1 412 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms